Query= MSMg01no157_c24.b1 MSMg01no157_c24.b1 CHROMAT_FILE:
MSMg01no157_c24.b1 PHD_FILE: MSMg01no157_c24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:22:29 2005
(320 letters)
>mm_chr10_23502121_23502840
Length = 720
Score = 451 bits (233), Expect = e-131
Identities = 282/317 (88%), Gaps = 31/317 (9%)
Strand = Plus / Minus
Query: 5 gaattcagggaaactatttttacactgcaataattttttcttgaaccatgtttattgcga 64
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 453 gaattcagggaaactatttttacactgcaataattttttcttgaaccatggttatt---- 398
Query: 65 cattaaggcaatagcacagggttgggcgagtgacgtgaaaagt-aattacaaacctagta 123
|||||||||||||||| | |||||||||||||||
Sbjct: 397 -------------------------gcgagtgacgtgaaaa-tccattacaaacctagta 364
Query: 124 tttgtccttttattttccatttcagctcaacccccctcattgacatttaaaactgaacat 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 363 tttgtccttttattttccatttcagctcaacccccctcattgacatttaaaactgaacat 304
Query: 184 aaaagttctgtttgagccgggcgtggtggcgcacgcctttaatcccagcacttgggaggc 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 aaaagttctgtttgagccgggcgtggtggcgcacgcctttaatcccagcacttgggaggc 244
Query: 244 agaggcaggcggatttctgagttcgaggccagcctggtctacacagtgagttccagggct 303
|||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||
Sbjct: 243 agaggcaggcggatttctgagttcaaggccagcctggtctacacagtgaattccagggct 184
Query: 304 gtacagagaaaccctgt 320
|||||||||||||||||
Sbjct: 183 gtacagagaaaccctgt 167
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 320
Length of database: 720
Length adjustment: 9
Effective length of query: 311
Effective length of database: 711
Effective search space: 221121
Effective search space used: 221121
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no157_c24.g1 MSMg01no157_c24.g1 CHROMAT_FILE:
MSMg01no157_c24.g1 PHD_FILE: MSMg01no157_c24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:22:29 2005
(271 letters)
>mm_chr10_23415231_23415901
Length = 671
Score = 484 bits (250), Expect = e-141
Identities = 265/270 (98%)
Strand = Plus / Plus
Query: 1 agttcccagcacctacatagggagtctcacaaccaactgcctgtaagttcagctccagcg 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 201 agttcccagcacctacatagggagtctcacaaccaactgcctgtaagttcagctccaggg 260
Query: 61 gatccgtgccaacctctggccacaagggcacctacacacactttgaatacagaaacaggc 120
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gatccttgccaacctctggccacaagggcacctacacacactttgaatacagaaacaggc 320
Query: 121 atacacatagaactaaaaatgacatttaaattctgtagtcagacatacagtgctcatttt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 atacacatagaactaaaaatgacatttaaattctgtagtcagacatacagtgctcatttt 380
Query: 181 gtgcctttttctatctccttgaggtcaaagtggcttgtgcatgatcctcacccttggcaa 240
|||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||
Sbjct: 381 gtgcctttttctatctccttgaggtcaacgtggcatgtgcatgatcctcacccttggcaa 440
Query: 241 agggttcttgtttcttgtgttccaccaaga 270
||||||||| ||||||||||||||||||||
Sbjct: 441 agggttcttatttcttgtgttccaccaaga 470
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 271
Length of database: 671
Length adjustment: 9
Effective length of query: 262
Effective length of database: 662
Effective search space: 173444
Effective search space used: 173444
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|