Query= MSMg01no158_c07.b1 MSMg01no158_c07.b1 CHROMAT_FILE:
MSMg01no158_c07.b1 PHD_FILE: MSMg01no158_c07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:23:37 2005
(659 letters)
>mm_chr10_49377297_49378356
Length = 1060
Score = 1207 bits (624), Expect = 0.0
Identities = 648/656 (98%), Gaps = 1/656 (0%)
Strand = Plus / Minus
Query: 5 gaattctcagttaaagttttgaaagctatgactatagctgcctgagtaaggaccttttgg 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 860 gaattctcagttaaagttttgaaagctatgactatagctgcctgagtaaggaccttttgg 801
Query: 65 gaattcacagtataacttgcaatcatacctgtctgaggacttgaaaaggattatgtggag 124
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 800 gaattcacagtaaaacttgcaatcatacctgtctgaggacttgaaaaggattatgtggag 741
Query: 125 catgtttttgttgtctctatagtgaaaaaatgccagtggttaagtacataaggtctgtgc 184
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 740 catgtttttgttgtctctatagtgaaaaaatgtcagtggttaagtacataaggtctgtgc 681
Query: 185 accagtgtcataacaataaaagtcttgattgtagggaatgatctcccatgttattacaaa 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 accagtgtcataacaataaaagtcttgattgtagggaatgatctcccatgttattacaaa 621
Query: 245 gaaagacttgtatataagggatatagtccaatgtcatgacaatgaaaaacttatatgtaa 304
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 620 gaaagacttgtatataagggatatagtccaatgtcatgacaatgaaagacttatatgtaa 561
Query: 305 gggatttattctagcatcatgacaatgaaagaattggcaataaggactatggtttcatga 364
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 ggaatttattctagcatcatgacaatgaaagaattggcaataaggactatggtttcatga 501
Query: 365 caacagaaagcccacatataaggggtgtggttcagtatcattatcacaaaaagctttatt 424
||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 caacagaaagcttatatataaggggtgtggttcagtatcattatcacaaaaagctttatt 441
Query: 425 ataagggatgccccatagtctcatgactcagaaaggcttctgaataacagatgtgttcta 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 ataagggatgccccatagtctcatgactcagaaaggcttctgaataacagatgtgttcta 381
Query: 485 gcaccatggcaggtaaaggtgaaggtagagtgggaaaatttcttatgattcttttgtttg 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 gcaccatggcaggtaaaggtgaaggtagagtgggaaaatttcttatgattcttttgtttg 321
Query: 545 tttatttgtatattccttatatttacatacagctgagttgaataagttaagtatcaatgt 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 tttatttgtatattccttatatttacatacagctgagttgaataagttaagtatcaatgt 261
Query: 605 gagaaaaagaacaatggaaaggacacgagaagg-aagttaatgcataaaaaggcta 659
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 260 gagaaaaagaacaatggaaaggacacgagaaggaaagttaatgcataaaaaggcta 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 659
Length of database: 1060
Length adjustment: 10
Effective length of query: 649
Effective length of database: 1050
Effective search space: 681450
Effective search space used: 681450
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no158_c07.g1 MSMg01no158_c07.g1 CHROMAT_FILE:
MSMg01no158_c07.g1 PHD_FILE: MSMg01no158_c07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:23:37 2005
(294 letters)
>mm_chr10_49248437_49249130
Length = 694
Score = 561 bits (290), Expect = e-164
Identities = 293/294 (99%)
Strand = Plus / Plus
Query: 1 accaattaaactgaatacaatttataatttataacgtgaatccctaagtgagaaaaatag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 accaattaaactgaatacaatttataatttataacgtgaatccctaagtgagaaaaatag 260
Query: 61 gcacttcaataattagaacacatgtaataattaattatagattggcaaaaatcaaacgaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gcacttcaataattagaacacatgtaataattaattatagattggcaaaaatcaaacgaa 320
Query: 121 cacaggaatgcaactttaaaaattgctcatttctagttcttgaattaataattattctac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cacaggaatgcaactttaaaaattgctcatttctagttcttgaattaataattattctac 380
Query: 181 aatttagttatcttaagcaaaataaaggcattttttaattaaacatttacattaaatgtt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aatttagttatcttaagcaaaataaaggcattttttaattaaacatttacattaaatgtt 440
Query: 241 atagtaaagaatgtttgtggccagtgaaatgtgcaggagtcttctcatttccat 294
||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 441 atagtaaagaatgtttgtggccaatgaaatgtgcaggagtcttctcatttccat 494
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 294
Length of database: 694
Length adjustment: 9
Effective length of query: 285
Effective length of database: 685
Effective search space: 195225
Effective search space used: 195225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
