XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTC
CTCATGTGTTGTGTTATTTAAAAAAAATGTTAAAAACCTATAAAAGCTTT
GGATAATAGAAGGGGCACCGTTTAAAGAGCAGTTACCCTCTTTGCATTTA
CCATAATACCAATCACACCTCAACTGAAATAATTTCTGTGACAGCTTTTT
AGTATAATTGTTTGTTCTTTGTGAAAGCAAGTAGAATGTTTTGTTTACTC
ATGAATGCTCAGTGGTTTCTTCGGCACCCAACCAAGTTTATTAAAGCAAG
GAATGAAAGCAGCGAATGAATGCTTTAAGGGACTCTTGAAAGGAACTTTC
TTCTACATGTTTCTAGATCCTTGCTTTTGATTTCCCTTTTAATCTACTAA
TTTCCATTTCCTTCATCCTAATGTGTGGTTTTAAAGCTGATTTTCAGTAT
TCAAAAATAATGCATGAAAATGGATTCCACCATCAACAACTGGAAATTTG
AATATGGAGTGAATTTAATATTTTAAATCTAATTGTAGATACAATAGGAA
ATGAGAAAGCCCATGACAGTGCTGGTGAAATGGATTACTTTCCTGTACTC
ATTCTGAGCCATTCAGAATATGCTCTGTTCTGCATTACTAATATAAAGTA
AAATAGTCTATAAAAAAATTAAAGGGTTTTATATTTTAGAATTGCAGCAG
AATTATATGAAAGTCTCAGTCTCATATTTCAGATAAAGATAATACTN

ATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXTGTGGTTCTGTGTTTCACGTTCGAGCCTGTGAT
CTACTGTGATCTACTGTGATCTACTGTGAGTTAACTTTGTGTTTAATATA
GGATCTATGCTTAGATGATGAAGATGGTGGTGACGAGGGTGATGGCAGTA
GTGGTAATGAAGATGATGATGAACATTTTGTATTTAGATGTGCATTTGTT
TATAACCATATGCTAATAAGTTTATGTTTCCTTGGTGTTCCCTTTAGTCC
TTTGTCAAGGAACAGTTGTTTGTATTCTCGTGGGAGCACTTTTAGGGACT
GTTTTTTGTTCCCCTGCCCCCCTTTTCGATCTTTCCCCACCATGACACTA
TTTTGACACCTACAGATTAATGGCTTCAGGTAGAATCAGTTCTTTATTTT
TTCCCTTTCCCCCAACATTGTTCTCACTATGATTGGTCTTCAGAAAATCC
ATGGAAACCTTGTCATTCTGTTAATGCCCACATATCAACTTCCTGGGCCA
TTGACTTGATTGCACTGAATCTGGCGATCCAGGTAGGATAATGGATAAAT
AAAGTCTTCCTTCCTATCTACAAGTATGGACAGTTGTTTCTATTTATTTA
ACTTTATCATTTTATTTATTAGATTTTTACAGTTTTCCTCAAATAGATAC
TGTATATGTTTTGATAGATTTGCATCTATGGATTTCATTTC

Query= MSMg01no158_d20.b1 MSMg01no158_d20.b1 CHROMAT_FILE:
MSMg01no158_d20.b1 PHD_FILE: MSMg01no158_d20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:23:44 2005
         (707 letters)



>mm_chr10_14619697_14620804
          Length = 1108

 Score = 1321 bits (683), Expect = 0.0
 Identities = 698/703 (99%), Gaps = 1/703 (0%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattcctcatgtgttgtgttattt-aaaaaaaatgttaaaaacctataaaagctttgga 63
           ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 907 gaattcctcatgtgttgtgttatttaaaaaaaaatgttaaaaacctataaaagctttgga 848

                                                                       
Query: 64  taatagaaggggcaccgtttaaagagcagttaccctctttgcatttaccataataccaat 123
           ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 847 taatagaaggggcactgtttaaagagcagttaccctctttgcatttaccataataccaat 788

                                                                       
Query: 124 cacacctcaactgaaataatttctgtgacagctttttagtataattgtttgttctttgtg 183
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 787 cacacctcaactgaaataatttctgtgacagctttttagtataattgtttgttctttgtg 728

                                                                       
Query: 184 aaagcaagtagaatgttttgtttactcatgaatgctcagtggtttcttcggcacccaacc 243
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 727 aaagcaagtagaatgttttgtttactcatgaatgctcagtggtttcttcggcacccaacc 668

                                                                       
Query: 244 aagtttattaaagcaaggaatgaaagcagcgaatgaatgctttaagggactcttgaaagg 303
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 667 aagtttattaaagcaaggaatgaaagcagcgaatgaatgctttaagggactcttgaaagg 608

                                                                       
Query: 304 aactttcttctacatgtttctagatccttgcttttgatttcccttttaatctactaattt 363
           |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 607 aactttcttctacatgtttctagatctttgcttttgatttcccttttaatctactaattt 548

                                                                       
Query: 364 ccatttccttcatcctaatgtgtggttttaaagctgattttcagtattcaaaaataatgc 423
           ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 547 ccatttctttcatcctaatgtgtggttttaaagctgattttcagtattcaaaaataatgc 488

                                                                       
Query: 424 atgaaaatggattccaccatcaacaactggaaatttgaatatggagtgaatttaatattt 483
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 487 atgaaaatggattccaccatcaacaactggaaatttgaatatggagtgaatttaatattt 428

                                                                       
Query: 484 taaatctaattgtagatacaataggaaatgagaaagcccatgacagtgctggtgaaatgg 543
           ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 427 taaatctaattgtagatacaataggaaatgagaaagcccatgacagtgctgatgaaatgg 368

                                                                       
Query: 544 attactttcctgtactcattctgagccattcagaatatgctctgttctgcattactaata 603
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 367 attactttcctgtactcattctgagccattcagaatatgctctgttctgcattactaata 308

                                                                       
Query: 604 taaagtaaaatagtctataaaaaaattaaagggttttatattttagaattgcagcagaat 663
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 307 taaagtaaaatagtctataaaaaaattaaagggttttatattttagaattgcagcagaat 248

                                                      
Query: 664 tatatgaaagtctcagtctcatatttcagataaagataatact 706
           |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 247 tatatgaaagtctcagtctcatatttcagataaagataatact 205


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 707
Length of database: 1108
Length adjustment: 10
Effective length of query: 697
Effective length of database: 1098
Effective search space:   765306
Effective search space used:   765306
X1: 9 (17.8 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 9 (18.3 bits)
S2: 9 (18.1 bits)