Query= MSMg01no163_p23.b1 MSMg01no163_p23.b1 CHROMAT_FILE:
MSMg01no163_p23.b1 PHD_FILE: MSMg01no163_p23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:31:43 2005
(312 letters)
>mm_chr10_127795146_127795857
Length = 712
Score = 596 bits (308), Expect = e-175
Identities = 308/308 (100%)
Strand = Plus / Minus
Query: 5 gaattccaggatagccagggctacatagacagatcctgtctcaagaaacaaaaataaaag 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 gaattccaggatagccagggctacatagacagatcctgtctcaagaaacaaaaataaaag 506
Query: 65 caaaacaaattttcccatcaatccaggcaggccctggggcataacaccaactggagctca 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 caaaacaaattttcccatcaatccaggcaggccctggggcataacaccaactggagctca 446
Query: 125 cctatggatggtgaggtacaaacgcatgagctcggtgaactgagggtcggtgtagcctaa 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 cctatggatggtgaggtacaaacgcatgagctcggtgaactgagggtcggtgtagcctaa 386
Query: 185 catgttggtaaaattgtgtgaccagtctagcctagagtcaatggctccgatactgctgcc 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 catgttggtaaaattgtgtgaccagtctagcctagagtcaatggctccgatactgctgcc 326
Query: 245 ctcccggtacagattccggtagatcttggctgcaacgcacggcagcttggcaatgaggtc 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ctcccggtacagattccggtagatcttggctgcaacgcacggcagcttggcaatgaggtc 266
Query: 305 catgcagt 312
||||||||
Sbjct: 265 catgcagt 258
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 312
Length of database: 712
Length adjustment: 9
Effective length of query: 303
Effective length of database: 703
Effective search space: 213009
Effective search space used: 213009
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no163_p23.g1 MSMg01no163_p23.g1 CHROMAT_FILE:
MSMg01no163_p23.g1 PHD_FILE: MSMg01no163_p23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:31:43 2005
(660 letters)
>mm_chr10_127662237_127663296
Length = 1060
Score = 1162 bits (601), Expect = 0.0
Identities = 644/669 (96%), Gaps = 19/669 (2%)
Strand = Plus / Plus
Query: 1 tcttcagttattcaattcccctgctgcaccccactccttaccccctcccccacccttaac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tcttcagttattcaattcccctgctgcaccccactccttaccccctcccccacccttaac 260
Query: 61 cccaatagactcaagggagccagagacccccatgagcgagcccaccctatcttagaggaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cccaatagactcaagggagccagagacccccatgagcgagcccaccctatcttagaggaa 320
Query: 121 gtgaactcaacctaactaccttccaagaaatctgaggaatgttctaaaccaggtgtcagt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gtgaactcaacctaactaccttccaagaaatctgaggaatgttctaaaccaggtgtcagt 380
Query: 181 caggactatactatgaacctcagctttgacacacacagacacgctgttctagttctccat 240
|||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 381 caggactatactatgagcctcagctttgacacacacagacacactgttctagttctccat 440
Query: 241 ccatggaccccatacttctggctccttggcttctgcgctcatcttttttttctccc-ccc 299
||||||||||||||||||||||||||||||||||||||||||| ||| |||
Sbjct: 441 ccatggaccccatacttctggctccttggcttctgcgctcatc----------cccgccc 490
Query: 300 cgccccc--------agagagaaaagggaatccaacctctttaccagaagttcgattcag 351
| ||||| |||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 491 ctccccctgctgaggagagagaaaaggaaatccaacctctttaccagaagttcgattcag 550
Query: 352 acctccacagctgtgaaggggttaagaggcagagccaattacctcaacctgcccctccca 411
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 551 acctccacagctgtgaaggggttaagaggcagagccaattacctcaacctgcccctccca 610
Query: 412 gggattaagagtcctctataaaggggactgtcaacccaggcaggtccagggggttattag 471
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 611 gggattaagagtcctctataaaggggactgtcaacccaggcaggtccagggggttattag 670
Query: 472 ggacccaggcgctgtgttcacccccactgccatgtgggaacttcggtctgcctccttttg 531
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 671 ggacccaggcactgtgttcacccccactgccatgtgggaacttcggtctgcctccttttg 730
Query: 532 gagggccatatttgctgagttctttgccaccctcttctatgtcttctttgggcttggagc 591
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 731 gagggccatatttgctgagttctttgccaccctcttctatgtcttctttgggcttggagc 790
Query: 592 ctcgctacgttgggcccctgggcccctacatgtcttgcaagtggctttggcctttgggct 651
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 791 ctcgctacgttgggcccctgggcccctacatgtcttgcaagtggctttggcctttggcct 850
Query: 652 ggccttggc 660
|||||||||
Sbjct: 851 ggccttggc 859
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 660
Length of database: 1060
Length adjustment: 10
Effective length of query: 650
Effective length of database: 1050
Effective search space: 682500
Effective search space used: 682500
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
