MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	MSMg01-164H18
Chromosome	10 (Build37)
Map Location	86,498,384 - 86,498,989
singlet/doublet	singlet
Overlap gene	none
Upstream gene	Fbxo7, Syn3, Timp3, EG627035, LOC672902, LOC100041419, EG382395, Hsp90b1, Nt5dc3, Fabp3-ps1, C630002B14Rik, Stab2
Downstream gene	1700113H08Rik, Ascl1, Pah, LOC100041517, ENSMUSG00000058934, Igf1, Tyms-ps
Link	Open Mouse BAC browser

Click to get alignment info.

name	Fbxo7 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:69754 MGI:1917004
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Syn3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:27204 MGI:1351334
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Timp3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:21859 MGI:98754
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG627035 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:627035 MGI:3646339
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 63 Proteins

name	LOC672902 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:672902
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	LOC100041419 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041419
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	EG382395 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:382395 MGI:3646116
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 73 Proteins

name	Hsp90b1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:22027 MGI:98817
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Nt5dc3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:103220 MGI:3513266
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 3 mRNAs

name	Fabp3-ps1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:14074 MGI:101929
definition	gene_synonym : Fabph-3; Fabph-ps1; Fabph3 note : fatty acid binding protein 3, muscle and heart, pseudogene 1 pseudo : _no_value

name	C630002B14Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:103466 MGI:2143852
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Stab2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:192188 MGI:2178743
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	1700113H08Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:76640 MGI:1923890
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 ESTs, 1 Protein

name	Ascl1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:17172 MGI:96919
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Pah (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:18478 MGI:97473
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100041517 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041517
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 Proteins

name	ENSMUSG00000058934 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:627270 MGI:3642077
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs

name	Igf1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:16000 MGI:96432
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	Tyms-ps (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:22172 MGI:98879
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA pseudo : _no_value

name	Fbxo7 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:116686125 GeneID:69754 MGI:1917004
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : F-box protein 7 transcript_id : NM_153195.2

name	Syn3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142378140 GeneID:27204 MGI:1351334
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : synapsin III transcript_id : NM_013722.2

name	Timp3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:119637812 GeneID:21859 MGI:98754
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : tissue inhibitor of metalloproteinase 3 transcript_id : NM_011595.2

name	EG627035 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:83027556 GeneID:627035 MGI:3646339
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 63 Proteins product : predicted gene, EG627035 transcript_id : XM_891676.1

name	EG382395 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94388519 GeneID:382395 MGI:3646116
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 73 Proteins product : predicted gene, EG382395 transcript_id : XM_487135.3

name	Hsp90b1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6755862 GeneID:22027 MGI:98817
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : heat shock protein 90kDa beta (Grp94), member 1 transcript_id : NM_011631.1

name	Nt5dc3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:51556238 GeneID:103220 MGI:3513266
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : 5'-nucleotidase domain containing 3 transcript_id : NM_001003939.1

name	Nt5dc3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:51491846 GeneID:103220 MGI:3513266
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : 5'-nucleotidase domain containing 3 transcript_id : NM_001003910.1

name	Nt5dc3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:51491877 GeneID:103220 MGI:3513266
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : 5'-nucleotidase domain containing 3 transcript_id : NM_153595.2

name	C630002B14Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:111494222 GeneID:103466 MGI:2143852
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA C630002B14 gene transcript_id : NM_175331.3

name	Stab2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141801480 GeneID:192188 MGI:2178743
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : stabilin 2 transcript_id : NM_138673.2

name	1700113H08Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94388521 GeneID:76640 MGI:1923890
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 ESTs, 1 Protein product : RIKEN cDNA 1700113H08 gene transcript_id : XM_354556.5

name	Ascl1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802882 GeneID:17172 MGI:96919
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : achaete-scute complex homolog-like 1 (Drosophila) transcript_id : NM_008553.4

name	Pah (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142367614 GeneID:18478 MGI:97473
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : phenylalanine hydroxylase transcript_id : NM_008777.2

name	LOC100041517 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149260999 GeneID:100041517
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 Proteins product : similar to Ubtf protein transcript_id : XM_001476509.1

name	ENSMUSG00000058934 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149261001 GeneID:627270 MGI:3642077
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs product : predicted gene, ENSMUSG00000058934 transcript_id : XM_001476525.1

name	Igf1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:133892662 GeneID:16000 MGI:96432
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : insulin-like growth factor 1 transcript_id : NM_010512.3

name	Igf1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:144227242 GeneID:16000 MGI:96432
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : insulin-like growth factor 1 transcript_id : NM_184052.2

name	Fbxo7 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:116686126 CCDS:CCDS24095.1 GeneID:69754 MGI:1917004
definition	codon_start : 1 product : F-box only protein 7 protein_id : NP_694875.2

name	Syn3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:7305535 CCDS:CCDS24096.1 GeneID:27204 MGI:1351334
definition	GO_component : GO:0045202 - synapse [Evidence IDA]; GO:0008021 - synaptic vesicle [Evidence IEA]; GO:0030672 - synaptic vesicle membrane [Evidence IDA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0005509 - calcium ion binding [Evidence IEA]; GO:0003824 - catalytic activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA] GO_process : GO:0007269 - neurotransmitter secretion [Evidence IEA] codon_start : 1 exception : mismatches in translation note : synapsin 3; Synapsin IIIa product : synapsin III protein_id : NP_038750.1

name	Timp3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6755793 CCDS:CCDS24097.1 GeneID:21859 MGI:98754
definition	GO_component : GO:0005604 - basement membrane [Evidence IDA]; GO:0005578 - extracellular matrix (sensu Metazoa) [Evidence IEA] GO_function : GO:0004857 - enzyme inhibitor activity [Evidence IEA]; GO:0008191 - metalloendopeptidase inhibitor activity [Evidence IEA] GO_process : GO:0007169 - transmembrane receptor protein tyrosine kinase signaling pathway [Evidence NAS] codon_start : 1 product : tissue inhibitor of metalloproteinase 3 protein_id : NP_035725.1

name	EG627035 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:83027557 GeneID:627035 MGI:3646339
definition	codon_start : 1 product : hypothetical protein protein_id : XP_896769.1

name	EG382395 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94388520 GeneID:382395 MGI:3646116
definition	codon_start : 1 product : hypothetical protein protein_id : XP_487135.3

name	Hsp90b1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6755863 GeneID:22027 MGI:98817
definition	GO_component : GO:0005783 - endoplasmic reticulum [Evidence IDA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0005509 - calcium ion binding [Evidence IEA]; GO:0050750 - low-density lipoprotein receptor binding [Evidence ISS]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0051082 - unfolded protein binding [Evidence IEA] GO_process : GO:0006457 - protein folding [Evidence IEA]; GO:0006986 - response to unfolded protein [Evidence IEA] codon_start : 1 note : tumor rejection antigen (gp96) 1; endoplasmin; transforming growth factor alpha regulated gene 2 product : tumor rejection antigen gp96 protein_id : NP_035761.1

name	Nt5dc3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:51491847 CCDS:CCDS24098.1 GeneID:103220 MGI:3513266
definition	GO_function : GO:0005488 - binding [Evidence IEA] codon_start : 1 exception : mismatches in translation note : isoform 3 is encoded by transcript variant 3; Grp94 neighboring nucleotidase variant 4 product : 5'-nucleotidase domain containing 3 isoform 3 protein_id : NP_001003910.1

name	Nt5dc3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:51491878 GeneID:103220 MGI:3513266
definition	GO_function : GO:0005488 - binding [Evidence IEA] codon_start : 1 exception : mismatches in translation note : isoform 2 is encoded by transcript variant 2; Grp94 neighboring nucleotidase variant 4 product : 5'-nucleotidase domain containing 3 isoform 2 protein_id : NP_705823.2

name	Nt5dc3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:51556239 CCDS:CCDS24099.1 GeneID:103220 MGI:3513266
definition	GO_function : GO:0005488 - binding [Evidence IEA] codon_start : 1 exception : mismatches in translation note : isoform 1 is encoded by transcript variant 1; Grp94 neighboring nucleotidase variant 4 product : 5'-nucleotidase domain containing 3 isoform 1 protein_id : NP_001003939.1

name	C630002B14Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:111494223 GeneID:103466 MGI:2143852
definition	codon_start : 1 note : TU12B1-TY protein homolog product : hypothetical protein LOC103466 protein_id : NP_780540.2

name	Stab2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:20149764 GeneID:192188 MGI:2178743
definition	GO_component : GO:0009897 - external side of plasma membrane [Evidence ISS]; GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0008368 - Gram-negative bacterial binding [Evidence ISS]; GO:0005540 - hyaluronic acid binding [Evidence ISS] [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA] GO_process : GO:0006897 - endocytosis [Evidence ISS] [Evidence IEA] codon_start : 1 product : stabilin-2 protein_id : NP_619614.1

name	1700113H08Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94388522 GeneID:76640 MGI:1923890
definition	codon_start : 1 product : hypothetical protein LOC76640 protein_id : XP_354556.4

name	Ascl1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:40254630 CCDS:CCDS24101.1 GeneID:17172 MGI:96919
definition	GO_component : GO:0005634 - nucleus [Evidence IDA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0030528 - transcription regulator activity [Evidence IEA] GO_process : GO:0030154 - cell differentiation [Evidence IEA]; GO:0007275 - development [Evidence IEA]; GO:0010001 - glial cell differentiation [Evidence IGI]; GO:0007399 - nervous system development [Evidence IEA]; GO:0007400 - neuroblast fate determination [Evidence IMP]; GO:0043350 - neuroblast proliferation (sensu Vertebrata) [Evidence IGI]; GO:0030182 - neuron differentiation [Evidence IMP] [Evidence IGI]; GO:0048663 - neuron fate commitment [Evidence IMP] [Evidence IGI]; GO:0001764 - neuron migration [Evidence IMP] [Evidence IGI]; GO:0007219 - Notch signaling pathway [Evidence IGI]; GO:0007389 - pattern specification [Evidence IMP]; GO:0045449 - regulation of transcription [Evidence IEA] codon_start : 1 note : mammalian achaete scute homolog 1 product : achaete-scute complex homolog-like 1 protein_id : NP_032579.2

name	Pah (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6679203 CCDS:CCDS24102.1 GeneID:18478 MGI:97473
definition	GO_function : GO:0016597 - amino acid binding [Evidence IEA]; GO:0003824 - catalytic activity [Evidence IEA]; GO:0005506 - iron ion binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0004497 - monooxygenase activity [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]; GO:0004505 - phenylalanine 4-monooxygenase activity [Evidence IMP] GO_process : GO:0009072 - aromatic amino acid family metabolism [Evidence IEA]; GO:0006559 - L-phenylalanine catabolism [Evidence IEA]; GO:0008152 - metabolism [Evidence IEA] codon_start : 1 exception : mismatches in translation product : phenylalanine hydroxylase protein_id : NP_032803.1

name	LOC100041517 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149261000 GeneID:100041517
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001476559.1

name	ENSMUSG00000058934 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149261002 GeneID:627270 MGI:3642077
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001476575.1

name	Igf1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:34576545 CCDS:CCDS24103.1 GeneID:16000 MGI:96432
definition	GO_component : GO:0005576 - extracellular region [Evidence IEA]; GO:0005615 - extracellular space [Evidence IDA] GO_function : GO:0008083 - growth factor activity [Evidence IEA]; GO:0005179 - hormone activity [Evidence IEA]; GO:0005159 - insulin-like growth factor receptor binding [Evidence IPI]; GO:0005515 - protein binding [Evidence IPI]; GO:0018445 - prothoracicotrophic hormone activity [Evidence IEA] GO_process : GO:0006916 - anti-apoptosis [Evidence IDA]; GO:0035264 - body growth [Evidence IDA]; GO:0048468 - cell development [Evidence IMP]; GO:0010001 - glial cell differentiation [Evidence IMP]; GO:0048009 - insulin-like growth factor receptor signaling pathway [Evidence IC] [Evidence IDA]; GO:0007399 - nervous system development [Evidence IMP]; GO:0009887 - organ morphogenesis [Evidence IMP]; GO:0007582 - physiological process [Evidence IEA] codon_start : 1 note : isoform 2 is encoded by transcript variant 2 product : insulin-like growth factor 1 isoform 2 protein_id : NP_908941.1

name	Igf1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6754308 CCDS:CCDS24104.1 GeneID:16000 MGI:96432
definition	GO_component : GO:0005576 - extracellular region [Evidence IEA]; GO:0005615 - extracellular space [Evidence IDA] GO_function : GO:0008083 - growth factor activity [Evidence IEA]; GO:0005179 - hormone activity [Evidence IEA]; GO:0005159 - insulin-like growth factor receptor binding [Evidence IPI]; GO:0005515 - protein binding [Evidence IPI]; GO:0018445 - prothoracicotrophic hormone activity [Evidence IEA] GO_process : GO:0006916 - anti-apoptosis [Evidence IDA]; GO:0035264 - body growth [Evidence IDA]; GO:0048468 - cell development [Evidence IMP]; GO:0010001 - glial cell differentiation [Evidence IMP]; GO:0048009 - insulin-like growth factor receptor signaling pathway [Evidence IC] [Evidence IDA]; GO:0007399 - nervous system development [Evidence IMP]; GO:0009887 - organ morphogenesis [Evidence IMP]; GO:0007582 - physiological process [Evidence IEA] codon_start : 1 note : isoform 1 is encoded by transcript variant 1 product : insulin-like growth factor 1 isoform 1 protein_id : NP_034642.1

name	Fabp3-ps1 (CDS detail)
type	TATA_signal
link	vega ensembl
xref
definition	gene_synonym : Fabph-3; Fabph-ps1; Fabph3

name	LOC672902 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:672902
definition	number : 2 pseudo : _no_value

name	LOC672902 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:672902
definition	number : 1 pseudo : _no_value

name	LOC100041419 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041419
definition	number : 1 pseudo : _no_value

name	LOC100041419 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041419
definition	number : 2 pseudo : _no_value

name	LOC100041419 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041419
definition	number : 3 pseudo : _no_value

name	LOC100041419 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041419
definition	number : 4 pseudo : _no_value

name	LOC100041419 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041419
definition	number : 5 pseudo : _no_value

name	LOC100041419 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041419
definition	number : 6 pseudo : _no_value

name	Fabp3-ps1 (CDS detail)
type	polyA_signal
link	vega ensembl
xref
definition	gene_synonym : Fabph-3; Fabph-ps1; Fabph3

name	Fabp3-ps1 (CDS detail)
type	misc_recomb
link	vega ensembl
xref
definition	gene_synonym : Fabph-3; Fabph-ps1; Fabph3 note : putative pseudogene (retroposon)

name	Tyms-ps (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:24586682 GeneID:22172 MGI:98879
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : thymidylate synthase, pseudogene pseudo : _no_value transcript_id : NR_000040.1

clone name	MSMg01-390B19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-332O17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-415J02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-145O06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-204B19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-493K23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-520B12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-166L21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-263P07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-545O23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-313M01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-510K21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-053K16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-066K02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-355L13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-066B03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-083M02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-264O07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-501L01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-126C22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-323O03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-508N14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-437K11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-113D14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-113E15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-410P08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-160O03
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-422A05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-322B02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-354C15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-099O01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-352D22
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-429G11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-430O21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-499E10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-461N17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-391D12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-290L20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-266L17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-468O21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-343N17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-384K06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-438I19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-353F02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-541D10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-294G14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-213N13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-495E12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-495J13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-433A04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-164H18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-180C11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-048H08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-294J19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-231E19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-358G09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-131C01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-463M22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-375L18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-145A12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-450A15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-429O22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-348F08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-469O16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-459C03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-380G20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-068N12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-544B05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-484K22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-369G19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-267J11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-431A09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-119J15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-147P20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-155M13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-436G03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-300N19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-459A15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-350K21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-074D07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-106I04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-350N04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-395E05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-369J07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-434G21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-379O23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-517H05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-143L07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-078A02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-177B01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-121L02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-395N03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-332J11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-176C14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-457E15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-343K09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-138M23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-197J24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-180F01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-035E10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-200M20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-252O16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-125L06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-054C02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-111G24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-217K21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-152L11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-246H14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-213M22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-278B12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-225L09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-265O14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-313C19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-300P16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-102N14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-298N16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-260L01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-207L11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-012L06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-300E05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-322C02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-286I02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-200F18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-087H13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-272O06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-073D09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-284H23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-195K14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-136C10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-288M15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-150I07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-175G10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-335O04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-228P21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-283K19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-056A02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-031O06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-031O08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-138C17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-232E24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-335A07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-312J03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-041E18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-121B01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-166D19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-240H19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-035G18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-140P24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-320O13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-226N20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-108C18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-273E11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-131P06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-346K04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-141C23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-147E22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-017G13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-316D04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-331K10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-071O24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-135A20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-314C20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-182C23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-182E19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-190G07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-345H07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-230L16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-277G21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-092O15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-253G17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-071K12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-073F19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-061F09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-176N21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-138E21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-022L05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-121A22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-024P16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-225O12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-258K12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-119N03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-163L06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-272J09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-223F01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-238M22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-292F23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-235P02
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	MSMg01-164H18.T7 (MSMg01no164_h18.b1)	MSMg01-164H18.TJ (MSMg01no164_h18.g1)
ACC	AG362947	AG362948
length	738	733
length of high quality (start - end)	319 (45 - 363)	576 (73 - 648)
definition	CHROMAT_FILE: MSMg01no164_h18.b1 PHD_FILE: MSMg01no164_h18.b1.phd.1 CHEM: term DYE: big TIME: Tue May 17 19:32:21 2005	CHROMAT_FILE: MSMg01no164_h18.g1 PHD_FILE: MSMg01no164_h18.g1.phd.1 CHEM: term DYE: big TIME: Tue May 17 19:32:21 2005
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	CATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA ATTCCACATAAAACCAGAGACACTGAAACTTATGAGGAGAAAGTAGGGAA AAGCCTCGAAGATATGGGTACAGGGGAAAAATTCCTGAATAGAACAGCAA TGGCTTGTGCTGTAAGATCGAGAATCGACAAATGGGACCTCATAAAATTG CAAAGCGACAGGTGTCCGCCTGGCTTGGGAGGCGACCTCAGCCTCAGCAG CAGCGGTCGCCATCTTGGTTCCGGGACTCAGCTGAATTTAGGAAATTAGT CTGAACAGGTTAGAGGGTGCACCAGAGAACCGGACAGCTTCTGGGACGGG CAGAAGCACAGATTCTCTGAGGCACCCCCCTGGCCGGGCCGCAGATAACC GGCCACCATCCGGACCACACCACAGGTGTCCGCCTGGCTCAGGAGACAGC CTCGGCCTCAGGAGCAGCGGTCACCATCTTGGTTCCAGGACTCCCTGGAA CTTAGGATTTTAGTCTGCACAGGTGAGAGTCTGCACCACAGAAGCTGACA GCTTCTGGGAACTGCCAAAGCAACACAGCTTCTGAGAGAGGCCCTGTTTT GGGCCTTCTTCTTCGACCAGGAGGAGGTCCAAAAACAAGATATCTGCGCA CCTTCCCTGTAAGAGAGCTTGCCAGCAGAGAGTGCTCTGAGCACTGAAAC TCAGAGGAGAGAATCTGTCTCCCAGGTCTGCTGAGAGA	AATGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXTTGAGCTCTTTTCATTGTTGCCCAACCT AAAATTTAACTGCTGTGAGTTCTTAATATGAGAAGAAGCCATGAGACTTG GACGTATGTTAATTTCTGCTACAGAGAAAGTTGATTGTAGGCCTAGGCAG CACATAGCGTTCACCACTGAGGATGAATCCTCCTGTGACTTTTCCCCCCT TCTCTTTGCAAAACTCCATCTCTTGGAATTGTTGGGCGATGTGGGAAAAT ATTGTGACAAACATTGCTGTTTACCCTTGCAGTGGCGGCGACTTGTTTTG TTTGCCTGGCCTATTGCCTCTGCTACTCTTTTTCATGGCTGGCGGCTCCC TGACAGCTCGGATTCCCCCGCTGACATCTGTTATAATGAGAGCGTAGACA GGAATAGATTTGCAAAATGATGGACTCACAATAGGACAGGAGCCGGTCCC CAAACTTCGCTTGAGATAAGCAGATGGGGTTTGAAACAGAGCATTTGAAC CGATTAGGTCTAGGTGAACGCCTGTATTCAGTCCTCCGGAGTCATTCTGT CCCCAACTTTTGTCCCTCCGTCCTTCACCCTTCGCTTCCCCCGAGTTGTA TACACGGAGGGTACTGATGGCATGTGTTGGGCTTCTTTTCTTCTTCCTAG GCTCCGTCCTGGATACAGGTCCTTCCAGTCTCT
quality values	Open. Hide. 12 12 12 12 11 16 28 41 39 33 32 32 28 28 37 44 33 33 33 37 33 33 43 48 35 35 30 32 32 36 57 57 53 57 57 57 57 57 57 33 32 22 26 26 40 41 57 48 42 42 42 42 50 51 68 68 68 68 68 68 68 68 68 51 51 51 51 50 50 50 51 51 50 50 68 68 51 51 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 57 57 57 57 57 57 57 57 50 57 57 57 68 46 50 46 46 46 48 68 68 68 68 68 68 68 68 68 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 68 68 57 57 57 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 59 52 52 47 47 59 59 59 59 59 57 57 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 59 68 68 68 68 59 68 68 68 68 59 59 59 59 57 57 57 57 57 57 57 57 57 59 57 57 57 57 57 57 54 54 54 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 59 59 68 68 68 68 68 68 59 59 47 39 39 30 30 30 37 42 48 54 68 68 68 43 43 31 32 35 42 43 59 59 59 57 57 57 57 57 57 59 59 59 59 59 48 47 34 30 26 15 13 8 8 8 8 8 10 11 18 11 12 17 10 10 10 12 13 14 17 12 12 10 10 11 16 18 18 36 41 47 47 48 48 48 48 48 48 57 57 57 57 48 59 59 59 48 48 48 48 48 47 37 37 31 28 18 8 6 6 6 6 8 12 30 30 47 34 32 30 28 33 32 35 28 36 28 37 43 44 48 48 48 48 48 48 48 48 48 48 48 48 57 48 48 54 54 54 57 59 59 59 57 59 59 59 59 59 59 57 54 54 57 57 57 68 68 68 59 59 59 57 57 59 57 68 68 68 68 68 68 68 68 57 59 59 59 57 57 57 57 57 57 57 48 46 46 57 57 57 57 59 57 57 57 57 57 57 57 59 57 59 46 48 43 43 43 46 46 48 48 48 48 48 48 37 37 37 34 33 34 34 37 37 41 43 47 41 41 41 41 37 37 37 37 37 30 22 20 28 18 25 30 37 37 39 39 39 40 43 43 48 48 48 48 43 43 43 43 43 44 43 43 37 37 37 43 36 43 37 37 37 37 37 37 39 41 31 34 36 31 19 18 19 16 19 24 32 39 47 40 37 37 37 37 37 36 39 37 37 37 35 32 31 31 32 37 37 33 33 33 37 37 37 37 35 31 24 19 20 20 24 31 37 37 34 33 28 32 30 32 25 29 35 37 31 31 31 28 25 18 16 13 21 15 14 10 10 10 9 11 19 25 24 24 21 18 13 13 15 16 19 30 28 28 28 23 34 26 26 14 14 14 28 26 26 28 22 24 24 30 22 20 11 11 11 15 21 23 23 23 34 26 29 28 31 19 18 19 21 21 24 28 28 13 7 6 6 6 10 13 28 21 23 12 12 10 10 10	Open. Hide. 6 6 6 8 6 6 8 15 15 19 10 10 10 21 34 50 50 50 50 53 53 53 53 50 50 50 50 41 25 22 11 11 12 14 19 15 14 14 19 18 31 28 34 39 41 47 53 50 50 53 53 57 53 53 50 50 43 30 17 19 8 8 8 9 10 9 9 9 19 19 28 28 39 41 41 48 48 59 59 59 59 59 53 53 53 53 53 53 57 59 59 59 53 53 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 50 47 57 57 32 32 20 19 19 12 16 28 40 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 50 50 50 51 50 50 68 68 68 44 38 28 14 14 38 38 68 68 50 50 68 68 51 51 50 50 50 50 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 59 57 57 57 59 57 68 68 68 68 68 68 68 68 68 68 57 57 57 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 57 68 68 68 68 68 68 68 59 59 59 68 59 59 59 59 59 57 57 57 68 68 68 68 68 68 68 57 57 57 57 68 68 68 68 68 68 59 59 59 59 57 57 57 57 57 57 57 57 57 68 57 57 57 57 57 59 59 59 57 57 57 57 68 57 57 57 59 59 57 59 54 59 57 68 68 68 68 68 59 59 59 59 57 57 59 59 59 59 54 59 59 59 59 59 59 59 54 54 54 59 59 59 57 57 68 57 57 57 59 59 59 59 59 59 48 48 48 48 59 59 57 53 53 53 53 53 53 59 59 59 36 31 31 28 14 14 9 9 9 9 10 18 30 23 37 39 41 50 59 59 59 59 57 57 48 48 48 57 59 48 48 48 57 57 59 43 48 48 54 48 48 54 54 54 54 54 57 57 57 54 54 68 68 68 68 68 68 68 59 59 54 54 54 57 59 59 59 59 59 57 59 59 68 68 68 68 68 68 68 68 68 68 57 57 57 57 57 57 59 59 59 57 57 48 48 48 59 59 59 59 59 59 59 59 48 48 48 48 48 47 47 41 36 30 30 36 32 28 32 36 36 37 39 39 34 31 37 35 35 31 37 31 35 31 37 59 43 37 29 29 29 30 37 43 34 34 25 25 30 34 37 36 32 28 20 20 32 28 37 39 39 39 47 43 39 35 35 37 37 41 59 30 34 12 18 18 26 27 32 39 30 28 32 32 31 35 28 28 15 15 14 18 16 29 28 28 28 28 29 30 30 29 29 28 35 31 41 32 25 21 19 19 30 28 37 37 30 30 25 27 32 32 33 33 39 39 31 30 37 37 37 37 30 30 17 17 17 24 15 15 12 12 12 12 12 12 12 9 9 9 12 11 18 21 18 18 15 18 12 8 8 10 11 10 13 10 10 10 16 18 14 18 15 23 12 11 11 21 15 20 20 28 32 19 19 13 10 11 15 14 15 14 20 13 10 11 16 18 18 10 9 9 9 9 12 10 8 8 9 9 10 15 17 13 12 11 15 10 10 10 8 8 8 8

Alignment Information

BAC End 1

BAC End 2

Query= MSMg01no164_h18.g1 MSMg01no164_h18.g1 CHROMAT_FILE:
MSMg01no164_h18.g1 PHD_FILE: MSMg01no164_h18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:32:21 2005
         (576 letters)



>mm_chr10_86498214_86499189
          Length = 976

 Score = 1013 bits (524), Expect = 0.0
 Identities = 571/606 (94%), Gaps = 30/606 (4%)
 Strand = Plus / Plus

                                                                       
Query: 1   ttgagctcttttcattgttgcccaacctaaaatttaactgctgtgagttcttaatatgag 60
           ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 171 ttgagctcttttcattgctgcccaacctaaaatttaactgctgtgagttcttaatatgag 230

                                                                       
Query: 61  aagaagccatgagacttggacgtatgttaatttctgctacagagaaagttgattgtaggc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 231 aagaagccatgagacttggacgtatgttaatttctgctacagagaaagttgattgtaggc 290

                                                                       
Query: 121 ctaggcagcacatagcgttcaccactgaggatgaatc----------------------- 157
           |||||||||||||||||||||||||||||||||||||                       
Sbjct: 291 ctaggcagcacatagcgttcaccactgaggatgaatccaacgcctccatcctgcttcttt 350

                                                                       
Query: 158 -------ctcctgtgacttttccccccttctctttgcaaaactccatctcttggaattgt 210
                  |||||||||||||| |||||||||||||||||||| |||||||||||||||||
Sbjct: 351 attattgctcctgtgactttttcccccttctctttgcaaaacaccatctcttggaattgt 410

                                                                       
Query: 211 tgggcgatgtgggaaaatattgtgacaaacattgctgtttacccttgcagtggcggcgac 270
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 411 tgggcgatgtgggaaaatattgtgacaaacattgctgtttacccttgcagtggcggcgac 470

                                                                       
Query: 271 ttgttttgtttgcctggcctattgcctctgctactctttttcatggctggcggctccctg 330
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 471 ttgttttgtttgcctggcctattgcctctgctactctttttcatggctggcggctccctg 530

                                                                       
Query: 331 acagctcggattcccccgctgacatctgttataatgagagcgtagacaggaatagatttg 390
           |||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 531 acagctcggattcctctgctgacatctgttataatgagagcgtagacaggaatagatttg 590

                                                                       
Query: 391 caaaatgatggactcacaataggacaggagccggtccccaaacttcgcttgagataagca 450
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 591 caaaatgatggactcacaataggacaggagccggtccccaaacttcgcttgagataagca 650

                                                                       
Query: 451 gatggggtttgaaacagagcatttgaaccgattaggtctaggtgaacgcctgtattcagt 510
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 651 gatggggtttgaaacagagcatttgaaccgattaggtctaggtgaacgcctgtattcagt 710

                                                                       
Query: 511 cctccggagtcattctgtccccaacttttgtccctccgtccttcacccttcgcttccccc 570
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 711 cctccggagtcattctgtccccaacttttgtccctccgtccttcacccttcgcttccccc 770

                 
Query: 571 gagttg 576
           ||||||
Sbjct: 771 gagttg 776


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 576
Length of database: 976
Length adjustment: 10
Effective length of query: 566
Effective length of database: 966
Effective search space:   546756
Effective search space used:   546756
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information