Query= MSMg01no164_k06.b1 MSMg01no164_k06.b1 CHROMAT_FILE:
MSMg01no164_k06.b1 PHD_FILE: MSMg01no164_k06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:32:33 2005
(321 letters)
>mm_chr10_68035086_68035806
Length = 721
Score = 576 bits (298), Expect = e-169
Identities = 310/314 (98%)
Strand = Plus / Plus
Query: 5 gaattccaacccaattcagatccttccagggaagatttgtgactctgtctgtaggcagga 64
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 205 gaattccaacccaattcagatccttccggggaagatttgtgactctgtctgtaggcagga 264
Query: 65 ctggacttctattgcacctgacatgagtgtacatgaggagctcattaaccctcctgggaa 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ctggacttctattgcacctgacatgagtgtacatgaggagctcattaaccctcctgggaa 324
Query: 125 ggtggtacccttagaaatacccagcgtctgcctctgaaaacatgttccatatctttgtaa 184
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 gatggtacccttagaaatacccagcgtctgcctctgaaaacatgttccatatctttgtaa 384
Query: 185 agaagatgaaagcttcatcttaaagagccaaggttagtgatcgaccactggcctgtgttc 244
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 385 agaagatgaaagcttcatcttaaagagccaaggttagtgatcgaccactggcccgtgttc 444
Query: 245 agcgggtgctcctcacacaccacataacgccagctctcccttcctctccactctgccttc 304
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 445 agcgggtgctcctcacacaccacataacaccagctctcccttcctctccactctgccttc 504
Query: 305 agagcccagggttc 318
||||||||||||||
Sbjct: 505 agagcccagggttc 518
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 321
Length of database: 721
Length adjustment: 9
Effective length of query: 312
Effective length of database: 712
Effective search space: 222144
Effective search space used: 222144
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no164_k06.g1 MSMg01no164_k06.g1 CHROMAT_FILE:
MSMg01no164_k06.g1 PHD_FILE: MSMg01no164_k06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:32:33 2005
(239 letters)
>mm_chr10_68141929_68142570
Length = 642
Score = 360 bits (186), Expect = e-104
Identities = 226/240 (94%), Gaps = 5/240 (2%)
Strand = Plus / Minus
Query: 4 gtaggaatttaagttg-aatgtttcctgagaaaagcaaacacatgaccaaggaagcctta 62
|||||||||||||||| ||||||||||||| |||||||| |||||||||||||| |||||
Sbjct: 398 gtaggaatttaagttgtaatgtttcctgaggaaagcaaagacatgaccaaggaaacctta 339
Query: 63 ataacttc--tcatatatatcaaata-ttgccccctttttctgctaaaggaaagcaaaag 119
|||||||| | |||||||| ||||| |||||||||||| ||| ||||||||||||||||
Sbjct: 338 ataacttcttttatatatat-aaatagttgcccccttttcctgttaaaggaaagcaaaag 280
Query: 120 catccgtgacccccagaatgtgatgccttaaatacaaggaggctattatttatactgtcc 179
||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 279 catccgtgatccccagaatgtgataccttaaatacaaggaggctattatttatactgtcc 220
Query: 180 accaagaagcatcttctctttctttctctctttccttccttccttccctcctccttcctc 239
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 219 accaagaagcatcttctctttctttctctcttttcttccttccttccctcctccttcctc 160
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 239
Length of database: 642
Length adjustment: 9
Effective length of query: 230
Effective length of database: 633
Effective search space: 145590
Effective search space used: 145590
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
