Query= MSMg01no165_n07.b1 MSMg01no165_n07.b1 CHROMAT_FILE:
MSMg01no165_n07.b1 PHD_FILE: MSMg01no165_n07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:34:08 2005
(640 letters)
>mm_chr10_53206153_53207192
Length = 1040
Score = 1145 bits (592), Expect = 0.0
Identities = 619/634 (97%), Gaps = 10/634 (1%)
Strand = Plus / Plus
Query: 7 gaggcccaaaaaggtggtaggtgctgcctgatttgagcagtcatggcagcccctcctcta 66
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 207 gaggcccaaaaaggtggtaggtgctgcctgatttgagcagtcatggcagcccctcctcta 266
Query: 67 tattgtaggacacagaaatgccagctatataagttttatttcactttttccatgaaagtc 126
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 tattgtaggacacagaaatgccagctatataagttttatttcactttttccatgaaagtc 326
Query: 127 cgatacagagttattagtaaaacctgaaaattccctgtagatctccacactaaaaaatta 186
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 tgatacagagttattagtaaaacctgaaaattccctgtagatctccacactaaaaaatta 386
Query: 187 tattgaaaagacttgttttgttttgttttgttttgtttttttccaccaggatctcatttg 246
||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 387 tattgaaaagacttgttttgttttgtttt----------tttccaccaggatctcatttg 436
Query: 247 agtcctaattaacaggtttcatgaattttcctcggggaaatggcatgtggcaaataaaaa 306
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 agtcctaattaacagggttcatgaattttcctcggggaaatggcatgtggcaaataaaaa 496
Query: 307 gaaaagaaacaatgtaagacaagtgacaagcccaggcctcccacaatggggcaccaattg 366
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 497 gaaaagaaacaatgtaagacaagtgacaagcccaggcctcccacaatggggcactaattg 556
Query: 367 tgggaacatgcttacaaaagagctgtattttaggccacattgatctgcaataaagatgtt 426
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 tgggaacatgcttacaaaagagctgtattttaggccacattgatctgcaataaagatgtt 616
Query: 427 ctagctatggtgtcttagtcagggtttctattcctgcaaaaagcatcttggccaagaagc 486
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 617 ctagctatggtgtcttagtcagggtttctattcctgcaaaaagcatcttggccaagaagc 676
Query: 487 aagtcggggaggaaagggtttattcagcttacactttcacattgctgttcatcaccaaag 546
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 677 aagtcggggaggaaagggtttattcagcttacactttcacattgctgttcatcaccaaag 736
Query: 547 gaagtcaggtcaggaactcaaacaggggaggaacctggaggcaggagctgatacagaggt 606
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 737 gaagtcaggtcaggaactcaaacaggggaggaacctggaggcaggagctgatacagaggc 796
Query: 607 catggaagaatactgcttattgaattgcttccct 640
|||||| |||||||||||||||||||||||||||
Sbjct: 797 catggaggaatactgcttattgaattgcttccct 830
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 640
Length of database: 1040
Length adjustment: 10
Effective length of query: 630
Effective length of database: 1030
Effective search space: 648900
Effective search space used: 648900
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no165_n07.g1 MSMg01no165_n07.g1 CHROMAT_FILE:
MSMg01no165_n07.g1 PHD_FILE: MSMg01no165_n07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:34:08 2005
(317 letters)
>mm_chr10_53338624_53339340
Length = 717
Score = 582 bits (301), Expect = e-171
Identities = 310/313 (99%)
Strand = Plus / Minus
Query: 1 acactcctcagagcaatgaagtgggttgccgtgctaacaactgtgataaagatcaaaggg 60
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 513 acactcctcagagcaatgaagtggattgccgtgctaacaactgtgataaagatcaaaggg 454
Query: 61 atggatctgactggggatgtctgcaggactccagatgctggggaagggaaaggggcagag 120
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 453 atggatctgactggggatatctgcaggactccagatgctggggaagggaaaggggcagag 394
Query: 121 agtggactgtttaagtggaagaactgtagctttaccaatagtgtacatattaactgtagg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 393 agtggactgtttaagtggaagaactgtagctttaccaatagtgtacatattaactgtagg 334
Query: 181 aaaatacacagcttttaagtgaatgttctgtttctgtaaacttcaaagttacaatgatca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 333 aaaatacacagcttttaagtgaatgttctgtttctgtaaacttcaaagttacaatgatca 274
Query: 241 cataaatctgccattcaaaaactacttgcacatatgaaaccatttgtgtatttggggttt 300
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 273 cataaatctgccattcaaaaagtacttgcacatatgaaaccatttgtgtatttggggttt 214
Query: 301 tttggtttttggg 313
|||||||||||||
Sbjct: 213 tttggtttttggg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 317
Length of database: 717
Length adjustment: 9
Effective length of query: 308
Effective length of database: 708
Effective search space: 218064
Effective search space used: 218064
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
