Query= MSMg01no166_e03.b1 MSMg01no166_e03.b1 CHROMAT_FILE:
MSMg01no166_e03.b1 PHD_FILE: MSMg01no166_e03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:34:42 2005
(528 letters)
>mm_chr10_94657084_94658011
Length = 928
Score = 959 bits (496), Expect = 0.0
Identities = 517/524 (98%), Gaps = 2/524 (0%)
Strand = Plus / Plus
Query: 6 aattctttgaagaacaagaagaaaaaaaagtggtttgtatctccactgatccaagcaatt 65
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 206 aattctttgaagaagaagaagaaaaaaaagtggtttgtatctccactgatccaagcaatt 265
Query: 66 aaatgcattagcagaagcaattaaagaagttattattgtctgtctgtgggtaaggagtgc 125
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 266 aaatgcattagcagaagcaattaaaaaagttattattgtctgtctgtgggtaaggagtgc 325
Query: 126 -acgaggatggcatgagttactggctgactgcatacttttttggtatcctttttaaagtg 184
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 ga-gaggatggcatgagttactggctgactgcatacttttttggtatcctttttaaagtg 384
Query: 185 gaaaacagataaaggtccccgggatcccagaaattcatagcaacaatgtgagcctagtca 244
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 385 gaaaacagataaaggtccccaggatcccagaaattcatagcaacaatgtgagcctagtca 444
Query: 245 tacaagtccctttcgtagcataaatcaccaccctcattagttgactgtcagcaggagatg 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 tacaagtccctttcgtagcataaatcaccaccctcattagttgactgtcagcaggagatg 504
Query: 305 acatccctgcatcataaattggactgtcatttctgagcaatgactcacaagtttgaaaga 364
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 acatccctgcatcataaatcggactgtcatttctgagcaatgactcacaagtttgaaaga 564
Query: 365 ggatttcattctacatccatgcctgctcctgaacaacatatttctctccttcttcttgct 424
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 ggatttgattctacatccatgcctgctcctgaacaacatatttctctccttcttcttgct 624
Query: 425 cccctctccttccttgtcccatatgcttgtgtgcctgtatgtgtgtgcatgcaagtgtgt 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 cccctctccttccttgtcccatatgcttgtgtgcctgtatgtgtgtgcatgcaagtgtgt 684
Query: 485 gtatgcatgcatgcatgagtgcgcggatgtatatgtgtgcacac 528
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 gtatgcatgcatgcatgagtgcgcggatgtatatgtgtgcacac 728
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 528
Length of database: 928
Length adjustment: 10
Effective length of query: 518
Effective length of database: 918
Effective search space: 475524
Effective search space used: 475524
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no166_e03.g1 MSMg01no166_e03.g1 CHROMAT_FILE:
MSMg01no166_e03.g1 PHD_FILE: MSMg01no166_e03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:34:42 2005
(591 letters)
>mm_chr10_94805101_94806092
Length = 992
Score = 683 bits (353), Expect = 0.0
Identities = 368/373 (98%), Gaps = 1/373 (0%)
Strand = Plus / Minus
Query: 220 tcacagagacctgggtttggttcccagcaaccacatggaaactccagcgcccaggcatct 279
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 992 tcacagagacctgggtttggttcccagcaaccacatggaaactccagcgcccaggcatct 933
Query: 280 gataccctcttatgacttctgttgacaccaagaatgcacatgctacgcagacatatatgc 339
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 932 gataccctcttatgacttctgttgacaccaagaatgcacatgctacgcagacatatatgc 873
Query: 340 accgcacatgctacgcagacatatatgcagtgcgcatgctatgcagacatatatgcaggc 399
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 872 agtgcacatgctacgcagacatatatgcagtgcgcatgctatgcagacatatatgcaggc 813
Query: 400 aaaacacacataaaaggaaacaaataactctagtaaacattaaaaagtaaagatttattt 459
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 812 aaaacacacataaaaggaaacaaataactctagtaaacattaaaaagtaaagatttattt 753
Query: 460 aaaaaaaaaaa-ctcaggggtgtttaccatacacagatgtagagaaccaaggctgagaaa 518
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 752 aaaaaaaaaaatctcaggggtgtttaccatacacagatgtagagaaccaaggctgagaaa 693
Query: 519 taacagtatttcaaattctttgttgatttttataggtgtagaaaaccataaaataggagt 578
||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||
Sbjct: 692 taacagtatttcaaattctttcttgatttttataggtgtagaaaaccatagaataggagt 633
Query: 579 ggagagacgttag 591
|||||||||||||
Sbjct: 632 ggagagacgttag 620
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 591
Length of database: 992
Length adjustment: 10
Effective length of query: 581
Effective length of database: 982
Effective search space: 570542
Effective search space used: 570542
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
