Query= MSMg01no166_i10.b1 MSMg01no166_i10.b1 CHROMAT_FILE:
MSMg01no166_i10.b1 PHD_FILE: MSMg01no166_i10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:35:03 2005
(312 letters)
>mm_chr10_84448874_84449585
Length = 712
Score = 565 bits (292), Expect = e-165
Identities = 304/308 (98%)
Strand = Plus / Minus
Query: 4 ggaattcaatgtgggaccggaatgaatgtcagcaaaggagactgaaaagaacggctgtca 63
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 511 ggaattcaatgtgggaccggaatgagtgtcagcaaaggagactgaaaagaacggctgtca 452
Query: 64 aaggccgtccaggcctggcctggcacagacatattgagaagcgcatgcaatatcatcagt 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 451 aaggccgtccaggcctggcctggcacagacatattgagaagcgcatgcaatatcatcagt 392
Query: 124 atttcaagattccaagatgcaaaagcttaaaaaaaaattaaacccaagcacaaagaggac 183
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 391 atttcaagattccaagatgcaaaagcttaaaaaaaaattaaacccaagcacagagaggac 332
Query: 184 caactcacagaggaaggcttctaggaagacaggaagaaaaacatgaacggcaaagaagca 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 331 caactcacagaggaaggcttctaggaagacaggaagaaaaacatgaacggcaaagaagca 272
Query: 244 gcttagcagcaagctagagagaggccaaaggccctcccgcaccctgagctggagggaggc 303
|||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||
Sbjct: 271 gcttagcagcaagctagagagaggccaaaggcccgcccgcagcctgagctggagggaggc 212
Query: 304 acacgcag 311
||||||||
Sbjct: 211 acacgcag 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 312
Length of database: 712
Length adjustment: 9
Effective length of query: 303
Effective length of database: 703
Effective search space: 213009
Effective search space used: 213009
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no166_i10.g1 MSMg01no166_i10.g1 CHROMAT_FILE:
MSMg01no166_i10.g1 PHD_FILE: MSMg01no166_i10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:35:03 2005
(655 letters)
>mm_chr10_84284398_84285456
Length = 1059
Score = 1168 bits (604), Expect = 0.0
Identities = 644/660 (97%), Gaps = 6/660 (0%)
Strand = Plus / Plus
Query: 1 aactctaaaaagggtctaggtttattg-----tttacaaaaaaaaagagtgactacccac 55
||||||||||||||||||||||||||| |||| |||||||||||||||||||||||
Sbjct: 201 aactctaaaaagggtctaggtttattgtttttttta-aaaaaaaaagagtgactacccac 259
Query: 56 tgtgcattgagatataagttattaccagtcagatccttaaccgccttctgtcctgaatcc 115
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 tgtgcatcgagatataagttattaccagtcagatccttaaccgccttctgtcctgaatcc 319
Query: 116 tcactttctcttgtttaaataaaataatttctgaagtatattttcagtaggaagcccaaa 175
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 tcactttctcttgtttaaataaaataatttctgaagtatattttcagtaggaagcccaaa 379
Query: 176 atttccatagtgatgtgccatggtattagattccaatttctgtttgacaaccctttcttt 235
|||||||||||| ||||||| ||||||||| |||||||||||||||||||||||||||||
Sbjct: 380 atttccatagtggtgtgccacggtattagactccaatttctgtttgacaaccctttcttt 439
Query: 236 tctgtacaactcaagtgacccctgaaatcaggatccacaattttccttcagaacacatcc 295
|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 tctgtacaacccaagtgacccctgaaatcaggatccacaattttccttcagaacacatct 499
Query: 296 cagcatgcccgactcctcacggaccccgaagtctgtcttctctcccgtgtgggagagatt 355
|||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||
Sbjct: 500 cagcatgcccgactcctcacagaccccgaagtctgtcttctctcctgtgtgggagagatt 559
Query: 356 gtatttgctgtcaccttggaatttcttttagatcatagttggtgacaatttttgccattt 415
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 gtttttgctgtcaccttggaatttcttttagatcatagttggtgacaatttttgccattt 619
Query: 416 gagggcaggttgaatctgtagaaacgatcaaaagcctgggaggctaagtttgcagaccaa 475
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 620 gagggcaggttgaatctgtagaaactatcaaaagcctgggaggctaagtttgcagaccaa 679
Query: 476 ggtgatgaaggtagtagggtgagggcccagagtgaagcctgtctgtagaggagagggact 535
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 ggtgatgaaggtagtagggtgagggcccagagtgaagcctgtctgtagaggagagggact 739
Query: 536 gaggtgctatgcgccatggctcgtgaggccctacccaataccccagatctgagggtgcat 595
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 gaggtgctatgcgccatggctcgtgaggccctacccaataccccagatctgagggtgcat 799
Query: 596 gcacaattgatgcacacctcactggatcactagctggatcccaggtctcagatgtgaaac 655
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 800 gcacaattgatgcacacctcactggatcactagctggatcccaggtctcagatgtgaaac 859
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 655
Length of database: 1059
Length adjustment: 10
Effective length of query: 645
Effective length of database: 1049
Effective search space: 676605
Effective search space used: 676605
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
