Query= MSMg01no167_h22.b1 MSMg01no167_h22.b1 CHROMAT_FILE:
MSMg01no167_h22.b1 PHD_FILE: MSMg01no167_h22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:36:16 2005
(255 letters)
>mm_chr10_43361874_43362528
Length = 655
Score = 449 bits (232), Expect = e-131
Identities = 247/252 (98%), Gaps = 2/252 (0%)
Strand = Plus / Plus
Query: 5 gaattctgagagtag-ctcagagagacaggcagggccaggagaaatcctgcaggccatgg 63
|||||||||||| || | ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctgagagcaggc-cagagagacaggcagggccaggagaaatcctgcaggccatgg 263
Query: 64 tgcagtttagtcagtaagtgaaataagaaactgcacaggagaaagagaacagggcacatg 123
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 264 tgcagtttagtcagtaagtgaaataagaaactgcacaggagagagagaacagggcacatg 323
Query: 124 acagggaacccaggaaacctgattaatcagcagaaaccgggtgacattgaagatggaaag 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 acagggaacccaggaaacctgattaatcagcagaaaccgggtgacattgaagatggaaag 383
Query: 184 gagacgttaaaagtggaaaaattttggtggggaggggttagagtaactgggtatgatgtt 243
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 gagacgttaaaaatggaaaaattttggtggggaggggttagagtaactgggtatgatgtt 443
Query: 244 ggataaaggaag 255
||||||||||||
Sbjct: 444 ggataaaggaag 455
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 255
Length of database: 655
Length adjustment: 9
Effective length of query: 246
Effective length of database: 646
Effective search space: 158916
Effective search space used: 158916
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no167_h22.g1 MSMg01no167_h22.g1 CHROMAT_FILE:
MSMg01no167_h22.g1 PHD_FILE: MSMg01no167_h22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:36:16 2005
(547 letters)
>mm_chr10_43506329_43507275
Length = 947
Score = 895 bits (463), Expect = 0.0
Identities = 490/499 (98%), Gaps = 1/499 (0%)
Strand = Plus / Minus
Query: 50 agatttaaaattctcttcaccacaatgactgtctatagatatcacttttcaaatatgcaa 109
||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||
Sbjct: 947 agatttaaaattctcttcaccacaatggctgtctataaatatcacttttcaaatatgcaa 888
Query: 110 tcaggacaatgcttgtttgtgagagttgggatttt-aaatgtatctgcactggatctggc 168
||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||
Sbjct: 887 tcaggacaatgcttgtttgtgagagttgggattttaaaatatatctgcactggatctggc 828
Query: 169 tggattatcaccttggataagtgatcaattttgtcaacaccaatatcttcatcttcaagt 228
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 827 aggattatcaccttggataagtgatcaattttgtcaacaccaatatcttcatcttcaagt 768
Query: 229 taagaaggctgaattggatgcctatggagatgccgcagtatagaagagaacactacatat 288
||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||
Sbjct: 767 taagaaggctgaattggatgcctatggagatgctgcagtatagaagacaacactacatat 708
Query: 289 atttttactatcatacatagagtagtagaattctccaacctaaaattgtttgggcccaat 348
|||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 707 atttttactaccatacatagagtagtagaattctccaacctaaaattgtttgggccgaat 648
Query: 349 aaaggcattgaatcataaagtcaactggcaccgtctttattctaagcaacagtaaataga 408
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 647 aaaggcattgaatcataaagtcaactggcaccgtctttattctaagcaacagtaaataga 588
Query: 409 tgcagaatataattagagccaaacaaattatttccttcatgacaggttatagaatttaac 468
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 587 tgcagaatataattagagccaaacaaattatttccttcatgacaggttatagaatttaac 528
Query: 469 atgcatgatggtttccatctttgaagttaacacaattacgtttgttttgtgccaattcat 528
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 527 atgcatgatggtttccatctttgaagttaacacaattacgtttgttttgtgccaattcat 468
Query: 529 ctgactccaaacatttcca 547
|||||||||||||||||||
Sbjct: 467 ctgactccaaacatttcca 449
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 547
Length of database: 947
Length adjustment: 10
Effective length of query: 537
Effective length of database: 937
Effective search space: 503169
Effective search space used: 503169
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
