Query= MSMg01no167_j23.b1 MSMg01no167_j23.b1 CHROMAT_FILE:
MSMg01no167_j23.b1 PHD_FILE: MSMg01no167_j23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:36:26 2005
(674 letters)
>mm_chr10_48586072_48587144
Length = 1073
Score = 1272 bits (658), Expect = 0.0
Identities = 667/670 (99%), Gaps = 1/670 (0%)
Strand = Plus / Plus
Query: 5 gaattcttggttctactcttagtaaacattggattctcaacactttatatttaagtgcaa 64
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcttggttcta-tcttagtaaacattggattctcaacactttatatttaagtgcaa 263
Query: 65 aaatattggcaagatgagtaaattgtcatttaactagtgaattgtaactaaaagatgaac 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 aaatattggcaagatgagtaaattgtcatttaactagtgaattgtaactaaaagatgaac 323
Query: 125 ttattcacatcatagacacaagtctttaacaaaataattgatggaaataattactcaaaa 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 ttattcacatcatagacacaagtctttaacaaaataattgatggaaataattactcaaaa 383
Query: 185 tagaaaatgaattgatgaatcaatgagtcagtgacttatgagaggctatatattttcaag 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 tagaaaatgaattgatgaatcaatgagtcagtgacttatgagaggctatatattttcaag 443
Query: 245 acttttcatgtttcatgacacttgaattcaaagaaagatctcaaataagaatgttaactg 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 acttttcatgtttcatgacacttgaattcaaagaaagatctcaaataagaatgttaactg 503
Query: 305 acttgcgtacctttaacgctggggatgcccaaatagaaataaattaatttttagatgtaa 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 acttgcgtacctttaacgctggggatgcccaaatagaaataaattaatttttagatgtaa 563
Query: 365 gggctaagtgtatatctcagtgatttttcttcatagcatggatgaagtttgggcttcaag 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 gggctaagtgtatatctcagtgatttttcttcatagcatggatgaagtttgggcttcaag 623
Query: 425 aatcagtctcacaccgattaatcaaatgatggagaaagtttaatataagcattcctgtaa 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 aatcagtctcacaccgattaatcaaatgatggagaaagtttaatataagcattcctgtaa 683
Query: 485 gggattaccattattagtttaatgaggtaggaaaactaaatagtgtagatgactccattc 544
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 gggattaccatgattagtttaatgaggtaggaaaactaaatagtgtagatgactccattc 743
Query: 545 cctggaagagaaataaactgtgtaaatggagaaaagtagcagagagcatcatacattcag 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 cctggaagagaaataaactgtgtaaatggagaaaagtagcagagagcatcatacattcag 803
Query: 605 tgttctcagcctcctgaataagggtgctgtttcctgttcctgcacatttcattttcctgc 664
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 804 tgttctcagcctcctgaataagggtgctgtttcctgttcctgcaaatttcattttcctgc 863
Query: 665 catggtagac 674
||||||||||
Sbjct: 864 catggtagac 873
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 674
Length of database: 1073
Length adjustment: 10
Effective length of query: 664
Effective length of database: 1063
Effective search space: 705832
Effective search space used: 705832
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no167_j23.g1 MSMg01no167_j23.g1 CHROMAT_FILE:
MSMg01no167_j23.g1 PHD_FILE: MSMg01no167_j23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:36:26 2005
(350 letters)
>mm_chr10_48604144_48604893
Length = 750
Score = 669 bits (346), Expect = 0.0
Identities = 349/350 (99%)
Strand = Plus / Minus
Query: 1 tctgtttccatttctttattgcttctatttccatattcaggtactaaaagaatgtgtatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 376 tctgtttccatttctttattgcttctatttccatattcaggtactaaaagaatgtgtatt 317
Query: 61 atgtcatttcagacttttggtcccactcttgtcttacctatgactcctgataagctgaac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 316 atgtcatttcagacttttggtcccactcttgtcttacctatgactcctgataagctgaac 257
Query: 121 tagaactaaagagatcacagggtggtcagactctgctatgagaagtgtttgttataaaac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 256 tagaactaaagagatcacagggtggtcagactctgctatgagaagtgtttgttataaaac 197
Query: 181 tacctgaagtctgactgaggttgatgaagtcaatccacaccaggttttcttatctttctg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 196 tacctgaagtctgactgaggttgatgaagtcaatccacaccaggttttcttatctttctg 137
Query: 241 tggtttgctttcctgtaggacatattcagggacatattaaggaattttgtttgtctttgt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 136 tggtttgctttcctgtaggacatattcagggacatattaaggaattttgtttgtctttgt 77
Query: 301 gcatctttagaaatagacagaagttaatagcaaccttttctatctctttt 350
||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 76 gcatctttagaaatagacagaagttaatagcaaccttttctatttctttt 27
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 350
Length of database: 750
Length adjustment: 9
Effective length of query: 341
Effective length of database: 741
Effective search space: 252681
Effective search space used: 252681
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
