Query= MSMg01no167_m19.b1 MSMg01no167_m19.b1 CHROMAT_FILE:
MSMg01no167_m19.b1 PHD_FILE: MSMg01no167_m19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:36:39 2005
(440 letters)
>mm_chr10_119850975_119851814
Length = 840
Score = 804 bits (416), Expect = 0.0
Identities = 431/436 (98%)
Strand = Plus / Minus
Query: 5 gaattctccaagtctcattgtaaacgcgcccgcgcacctacgcaactactttcaggatgc 64
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 640 gaattctccaagtcacattgtaaacgcgcccgcgcacctacgcaactactttcaggatgc 581
Query: 65 ttagagtttctgccactcgtgaagtcaagtatgatggcggttgtgtaggaaagtctatta 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 580 ttagagtttctgccactcgtgaagtcaagtatgatggcggttgtgtaggaaagtctatta 521
Query: 125 acagtgaaagtgatttggggttattttagtcactgttctgccttttctagtttgtgcttt 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 520 acagtgaaagtgatttggggttattttagtcactgttctgccttttctagtttgtgcttt 461
Query: 185 actgtattctgaactactatgtgttatgttccctttcaatgtgttggacccaatgagaat 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 460 actgtattctgaactactatgtgttatgttccctttcaatgtgttggacccaatgagaat 401
Query: 245 aattagcagagcagactgtctcgaggcatccgtttcattgtcacaccaaaggcaataaat 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 400 aattagcagagcagactgtctcgaggcatccgtttcattgtcacaccaaaggcaataaat 341
Query: 305 aagtcagagattcaacctcgaggagagtgaatatctattgcaaaggggacttcttagatc 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 340 aagtcagagattcaacctcgaggagagtgaatatctattgcaaaggggacttcttagatc 281
Query: 365 agcttacccacccaggctgggtagtacagtggtggctggctttacagagaagaattgctc 424
||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 280 agcttacagaggcaggctgggtagtacagtggtggctggctttacagagaagaattgctc 221
Query: 425 agttgaggaggctggg 440
||||||||||||||||
Sbjct: 220 agttgaggaggctggg 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 440
Length of database: 840
Length adjustment: 9
Effective length of query: 431
Effective length of database: 831
Effective search space: 358161
Effective search space used: 358161
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no167_m19.g1 MSMg01no167_m19.g1 CHROMAT_FILE:
MSMg01no167_m19.g1 PHD_FILE: MSMg01no167_m19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:36:39 2005
(338 letters)
>mm_chr10_119746670_119747408
Length = 739
Score = 590 bits (305), Expect = e-173
Identities = 333/347 (95%), Gaps = 10/347 (2%)
Strand = Plus / Plus
Query: 1 tgttttcggagcagacaaagaagaaacatggactgcagagcctgaggcgcacagatccgt 60
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 194 tgttttcggagcagacaaagaagaaacatggactgcagagcttgaggcgcacagatccgt 253
Query: 61 ctctctgtttccttgtgaactgggcaagcctgttcccttgattgtgaaatgaaacacaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 254 ctctctgtttccttgtgaactgggcaagcctgttcccttgattgtgaaatgaaacacaaa 313
Query: 121 agcttgtc--------ccaggcatgtgtctaacgttagtcacaggtgaggccgagccaat 172
|||| ||| ||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 314 agct-gtcaaaaactcccaggcatgtgtctaacattagtcacaggtgaggccgagccaat 372
Query: 173 ctgcactgtattgagcacagtcgaggggcggcttgggtggaggacatacagtta-gccgg 231
|||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||
Sbjct: 373 ctgcactgtattgagcacagtcgaggggcggcttgggtggaggacatacagtcaagccgg 432
Query: 232 gggtgggggccctgttttttaaccctccatatctcacagtctgtgggaaagtggcttggg 291
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 433 gggtgggggccctgttttttaaccctccatatctcacagtctgtgggaaaatggcttggg 492
Query: 292 tataatgtaagtcctgtgttatctggggtgagtggcagttatggggc 338
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 493 tataatgtaagtcctgtgttatctggggtgagtggcagttatggggc 539
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 338
Length of database: 739
Length adjustment: 9
Effective length of query: 329
Effective length of database: 730
Effective search space: 240170
Effective search space used: 240170
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
