Query= MSMg01no168_m05.b1 MSMg01no168_m05.b1 CHROMAT_FILE:
MSMg01no168_m05.b1 PHD_FILE: MSMg01no168_m05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:38:13 2005
(366 letters)
>mm_chr10_106089994_106090758
Length = 765
Score = 594 bits (307), Expect = e-174
Identities = 337/347 (97%), Gaps = 1/347 (0%)
Strand = Plus / Minus
Query: 18 gaattctgggaggaaagaaatctccttcatacttgccgttaaataccacggaataagaca 77
|||||||||||||||||||||||| ||||||||||||||||||||||| | |||||||||
Sbjct: 563 gaattctgggaggaaagaaatctcattcatacttgccgttaaataccaagaaataagaca 504
Query: 78 atgcccacagatttttctaaaaattctcacagacctcagccttgcttttcccccaactca 137
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 atggccacagatttttctaaaaattctcacagacctcagccttgcttttcccccaactca 444
Query: 138 tgtcatttataatgctcaaaattagccagatcctgggtgttaacacatagaagttttgcg 197
|||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 443 tgtcatttataatgctaaaaaatagccagatcctgggtgttaacacatagaagttttgcg 384
Query: 198 tgtggagattatattgccactgtagcatgttcatagcctgtgaaggaccatatttaaaaa 257
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 383 tgtggagattatattgccactgtagcatgttcatagcctgtgaaggaccatattt-aaaa 325
Query: 258 aaaaacatttacagacatacattcttttccttcttagacttttatttgctatgagtaaat 317
|||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||
Sbjct: 324 aaaaacatttacagacatccattcttttccttcttagacttttatttggtatgagtaaat 265
Query: 318 ttatgttctcataaaaagaccctgtaagagtcagcacctaggcccca 364
|||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 264 ttatgttctcataaaaagaccccgtaagagtcagcacctaggcccca 218
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 366
Length of database: 765
Length adjustment: 9
Effective length of query: 357
Effective length of database: 756
Effective search space: 269892
Effective search space used: 269892
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no168_m05.g1 MSMg01no168_m05.g1 CHROMAT_FILE:
MSMg01no168_m05.g1 PHD_FILE: MSMg01no168_m05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:38:13 2005
(373 letters)
>mm_chr10_105942099_105942871
Length = 773
Score = 683 bits (353), Expect = 0.0
Identities = 368/373 (98%)
Strand = Plus / Plus
Query: 1 acaccaggctacatgagcagcgatttctgcttacaatacatggcaaccaattctaaatat 60
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 201 acaccaggctacatgagcagtgatttctgcttacaatacatggcaaccaattctaaatat 260
Query: 61 aggttgctgtatatcgtcttgtaatactacagaaatatttgagaccacttggtccttgtt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aggttgctgtatatcgtcttgtaatactacagaaatatttgagaccacttggtccttgtt 320
Query: 121 gatgccaatatccaatttttgacatgtggaacttgtgatgaaaagtgagggtttagtaat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gatgccaatatccaatttttgacatgtggaacttgtgatgaaaagtgagggtttagtaat 380
Query: 181 agtgccaaatgctgtgtgtgctcaaccaacatcatatattgcactaaggacagaaattct 240
||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||
Sbjct: 381 agtgccaaatgctgtgtgtgctcaacctacttcatatattgcactaaggacagaaattct 440
Query: 241 acaggaaaaatgattctttagagataagcaccatagaaaagtcttccttgaaaagcctat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 acaggaaaaatgattctttagagataagcaccatagaaaagtcttccttgaaaagcctat 500
Query: 301 ggcattgttgcgtttgtgttgctatttttcttctagaaacaaatcaaatttggaaaacta 360
||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 501 ggcattgttgcgtttgtgttgctatttaacttctagaaacaaatcaaatttggaaaacta 560
Query: 361 taaaacatataaa 373
|||||||||||||
Sbjct: 561 taaaacatataaa 573
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 373
Length of database: 773
Length adjustment: 9
Effective length of query: 364
Effective length of database: 764
Effective search space: 278096
Effective search space used: 278096
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
