Query= MSMg01no169_j23.b1 MSMg01no169_j23.b1 CHROMAT_FILE:
MSMg01no169_j23.b1 PHD_FILE: MSMg01no169_j23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:39:21 2005
(316 letters)
>mm_chr10_127821488_127822203
Length = 716
Score = 582 bits (301), Expect = e-171
Identities = 310/313 (99%), Gaps = 1/313 (0%)
Strand = Plus / Plus
Query: 5 gaattcctatctcaaaaaa-tgtgaaacacagccgggtgtggtggctcatgtctttaatc 63
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 gaattcctatctcaaaaaaatgtgaaacacagccgggtgtggtggctcatgtctttaatc 263
Query: 64 ccagtattcaggaggtcgaggcaggcggatttctgagttcgaggccagcctggtctacaa 123
|||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 264 ccagtattcaggaggtagaggcaggcggatttctgagtttgaggccagcctggtctacaa 323
Query: 124 agtgagttccaggacagcctgggctttacagagaaactctgtctcaaaaaaaacaaacaa 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 agtgagttccaggacagcctgggctttacagagaaactctgtctcaaaaaaaacaaacaa 383
Query: 184 aaaaagtgtgaaacacaagctgtgtgtggttggtggcacacatctgtaagcccagccctt 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 aaaaagtgtgaaacacaagctgtgtgtggttggtggcacacatctgtaagcccagccctt 443
Query: 244 cggaggtgggaataagtaacaaaggataggtagagaccaggattcaaggacagccttggt 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 cggaggtgggaataagtaacaaaggataggtagagaccaggattcaaggacagccttggt 503
Query: 304 cgtagaatttgag 316
|||||||||||||
Sbjct: 504 cgtagaatttgag 516
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 316
Length of database: 716
Length adjustment: 9
Effective length of query: 307
Effective length of database: 707
Effective search space: 217049
Effective search space used: 217049
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no169_j23.g1 MSMg01no169_j23.g1 CHROMAT_FILE:
MSMg01no169_j23.g1 PHD_FILE: MSMg01no169_j23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:39:22 2005
(283 letters)
>mm_chr10_127967781_127968463
Length = 683
Score = 509 bits (263), Expect = e-148
Identities = 278/283 (98%)
Strand = Plus / Minus
Query: 1 tcattggtggaccttggtgattgtctcaggaaagagtcagtggccacccgaaggaacaga 60
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 609 tcattggtggaccttggtgattgtctcaggaaagagtcagtggccacatgaaggaacaga 550
Query: 61 cctagggggctagctttcagaatgtaatctaatggcttagcaagggaatggaagtggggt 120
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 549 cctagggggctagctttcagaatgtaatctaatggtttagcaagggaatggaagtggggt 490
Query: 121 gggaagacttgtgtgcagtgcttgggtctgctagagactccttcattcactcctttttga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 489 gggaagacttgtgtgcagtgcttgggtctgctagagactccttcattcactcctttttga 430
Query: 181 tttattattgggttgctgggtgttggtaagtggacactgttctatctggtaatttctgct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 429 tttattattgggttgctgggtgttggtaagtggacactgttctatctggtaatttctgct 370
Query: 241 acattggtttatcattgttaggcagccaaggaagctggaatgt 283
||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 369 acattggggtatcattgttaggcagccaaggaagctggaatgt 327
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 283
Length of database: 683
Length adjustment: 9
Effective length of query: 274
Effective length of database: 674
Effective search space: 184676
Effective search space used: 184676
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
