Query= MSMg01no170_e14.b1 MSMg01no170_e14.b1 CHROMAT_FILE:
MSMg01no170_e14.b1 PHD_FILE: MSMg01no170_e14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:40:12 2005
(314 letters)
>mm_chr10_27308202_27308915
Length = 714
Score = 507 bits (262), Expect = e-148
Identities = 297/315 (94%), Gaps = 12/315 (3%)
Strand = Plus / Minus
Query: 5 gaattccttctgagtctgcagtagttgagtagaaagatcgtgaaaggtgacatgggggtc 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 390 gaattccttctgagtctgcagtagttgagtagaaagatcgtgaaaggtgacatgggggtc 331
Query: 65 tagttatattagttaccttttttaacgtgacattcagacttagttcctggatttttaaga 124
||||||||||||||| ||||||||| ||||||||||||||||||||||||||| |||||
Sbjct: 330 tagttatattagttatattttttaacatgacattcagacttagttcctggatttgtaaga 271
Query: 125 atgtctgggaaccatgagatggataatccttgcactagtaattgtagcagaggatgattt 184
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 270 atgtctgggaaccatgagatggataatccttgcactaataattgtagcagaggatgattt 211
Query: 185 ctttcattttctcttttatcggatattttctttatctacatttcaaatgttatccccttt 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 210 ctttcattttctcttttatcggatattttctttatctacatttcaaatgttatccccttt 151
Query: 245 ccaggtctcccctcaggaaactccttatcttttttt--t----catccccctgcctctat 298
||||||||||||||||||||||||||||| | | |||||||||||||||||
Sbjct: 150 ccaggtctcccctcaggaaactccttatc------tcataccccatccccctgcctctat 97
Query: 299 gaggggnctccccta 313
|||||| ||||||||
Sbjct: 96 gaggggtctccccta 82
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 314
Length of database: 714
Length adjustment: 9
Effective length of query: 305
Effective length of database: 705
Effective search space: 215025
Effective search space used: 215025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no170_e14.g1 MSMg01no170_e14.g1 CHROMAT_FILE:
MSMg01no170_e14.g1 PHD_FILE: MSMg01no170_e14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:40:12 2005
(228 letters)
>mm_chr10_27137698_27138325
Length = 628
Score = 387 bits (200), Expect = e-112
Identities = 221/228 (96%)
Strand = Plus / Plus
Query: 1 ttctctctgactaaaggaaagcaaattcctgctgagtcctctcagcactgatgatacaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttctctctgactaaaggaaagcaaattcctgctgagtcctctcagcactgatgatacaaa 260
Query: 61 attacctttttctaaaattaaactccaaaggctttttcctcaaagcctcccatggttttc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 attacctttttctaaaattaaactccaaaggctttttcctcaaagcctcccatggttttc 320
Query: 121 agccgggataacaacacactggttatcttcccatggtcatccctctccctccatgccaag 180
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 321 agccgggataacaacacactggttatctccccatggtcatccctctccctccatgccaag 380
Query: 181 ccgaaatacttgatgtgccagggttaccacagttcacagggagctact 228
|| ||||||||||||||||| |||| ||||| |||||| ||||||||
Sbjct: 381 ccctaatacttgatgtgccagtgttatcacagctcacagtgagctact 428
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 228
Length of database: 628
Length adjustment: 9
Effective length of query: 219
Effective length of database: 619
Effective search space: 135561
Effective search space used: 135561
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|