Query= MSMg01no171_f18.b1 MSMg01no171_f18.b1 CHROMAT_FILE:
MSMg01no171_f18.b1 PHD_FILE: MSMg01no171_f18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:41:34 2005
(234 letters)
>mm_chr10_64818737_64819370
Length = 634
Score = 427 bits (221), Expect = e-124
Identities = 227/229 (99%)
Strand = Plus / Plus
Query: 5 gaattcatcagcctacaaaatgactagcagagtataatcttgtacgcatgaatataaatg 64
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 205 gaattcatcagcctacaaaatgactagcagagtataatcttgtactcatgaatataaatg 264
Query: 65 tcgtttgaaatacaaagtgattatgctggatagaaacaatctgtgatggtggttcaagca 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tcgtttgaaatacaaagtgattatgctggatagaaacaatctgtgatggtggttcaagca 324
Query: 125 tttcttctgtattaggtaaccatacttacttggatagatacaaagaggttcattagagat 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tttcttctgtattaggtaaccatacttacttggatagatacaaagaggttcattagagat 384
Query: 185 atgtaggtaggcaggcaggtaggtaggtaggtaggtaggtaggtaggta 233
||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 atgtaggcaggcaggcaggtaggtaggtaggtaggtaggtaggtaggta 433
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 5
Number of successful extensions: 5
Number of sequences better than 10.0: 1
Number of HSP's gapped: 4
Number of HSP's successfully gapped: 1
Length of query: 234
Length of database: 634
Length adjustment: 9
Effective length of query: 225
Effective length of database: 625
Effective search space: 140625
Effective search space used: 140625
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no171_f18.g1 MSMg01no171_f18.g1 CHROMAT_FILE:
MSMg01no171_f18.g1 PHD_FILE: MSMg01no171_f18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:41:34 2005
(283 letters)
>mm_chr10_64988121_64988802
Length = 682
Score = 501 bits (259), Expect = e-146
Identities = 277/283 (97%), Gaps = 1/283 (0%)
Strand = Plus / Minus
Query: 1 tggatgaatcaaatgcaaaagctccctaaggagatcctttccaaccaaacacaagggaag 60
||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 408 tggatgaatcaaa-gcaaaagctccctaaggagatactttccaaccaaacacaagggaag 350
Query: 61 ctcacagggatgtggagaggaaaacaatctcagtctaaagtgatcttattacatagcatt 120
|||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||
Sbjct: 349 ctcacagggatgtggagaagaaaacaatctcagtctaaagtgatcttactacatagcatt 290
Query: 121 ttagaaagcacaagtaccaggagaccctatcagactacccacagacaaaatattaggatt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 289 ttagaaagcacaagtaccaggagaccctatcagactacccacagacaaaatattaggatt 230
Query: 181 ctgtagtgaatatgtaacttatgtgtgactaaatatataaaagtatatttaaaagaataa 240
||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||
Sbjct: 229 ctgtagtgaatatgtaacttacgtgtgactaaatatataaaagtatatttaaaataataa 170
Query: 241 tttaaatgatgagatgaattaaatacacctaaaagaaaatatt 283
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 169 tttaaatgatgagatgaattaaatacacctaaaagaaaatatt 127
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 283
Length of database: 682
Length adjustment: 9
Effective length of query: 274
Effective length of database: 673
Effective search space: 184402
Effective search space used: 184402
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
