Query= MSMg01no172_e10.b1 MSMg01no172_e10.b1 CHROMAT_FILE:
MSMg01no172_e10.b1 PHD_FILE: MSMg01no172_e10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:42:42 2005
(315 letters)
>mm_chr10_109483911_109484625
Length = 715
Score = 511 bits (264), Expect = e-149
Identities = 299/312 (95%), Gaps = 3/312 (0%)
Strand = Plus / Minus
Query: 5 gaattccacgttatttaagttgatgcttcactgatcagaaccgactagttatttctttat 64
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 500 gaattccacgttatttaagttgatgcttcactgatcagagccgactagttatttctttat 441
Query: 65 taactttacacttgccaatgttagcaagagagagtggtttatgaaagtggtgttagcaat 124
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 taactttacacttggtaatgttagcaagagagagtggtttatgaaagtggtgttagcaat 381
Query: 125 gctttgacaacgtatgcaggctttgattgtacctattgttactgccttttatttttctat 184
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 gctttgaaaacgtatgcaggctttgattgtacctattgttactgccttttatttttctat 321
Query: 185 aattattttactcccttacaggacttcccagtccccaaattagttacggaaagcatttca 244
||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||
Sbjct: 320 aattattttactcccttacaggacttctcagtccccgaattagttacggaaagcatttca 261
Query: 245 cttacaaaaggggtgacttactgaacacatttctccctgtctgtgttgccagagagaag- 303
|||||||||||||||||||||||||| |||||||| ||||||||||||||||||| ||
Sbjct: 260 cttacaaaaggggtgacttactgaacgcatttctctatgtctgtgttgccagagaggaga 201
Query: 304 --tatctgacag 313
||||||||||
Sbjct: 200 actatctgacag 189
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 315
Length of database: 715
Length adjustment: 9
Effective length of query: 306
Effective length of database: 706
Effective search space: 216036
Effective search space used: 216036
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no172_e10.g1 MSMg01no172_e10.g1 CHROMAT_FILE:
MSMg01no172_e10.g1 PHD_FILE: MSMg01no172_e10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:42:42 2005
(288 letters)
>mm_chr10_109320952_109321639
Length = 688
Score = 482 bits (249), Expect = e-140
Identities = 276/285 (96%)
Strand = Plus / Plus
Query: 1 catcagaagatatataaaaatgagagctgttctccgaagtaaatgaggcccactttatat 60
||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||
Sbjct: 201 catcagaagatatataaaaatgagagctgttctccgaagtaaatgaggcatactttttat 260
Query: 61 tctaagccacaggaaaaaaaaccattctttcaaaagttgtatttgcatcttcactgttga 120
||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||
Sbjct: 261 tctaagccacaggaaaaaaaagcattctttcaaaagttgtatttgcatcttcacagttga 320
Query: 121 gggagcctgtggctaaatgcaaacactatgtttcctatcttaaaagatcaatgtgcatgg 180
| |||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 321 gtgagcctgtggttaaatgcaaacactatgtttcctatcttaaaaggtcaatgtgcatgg 380
Query: 181 atgttaagtactcagagtagtatgacagccagctcataaacatttaaagtgagcaaggaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 atgttaagtactcagagtagtatgacagccagctcataaacatttaaagtgagcaaggaa 440
Query: 241 ggaagtctcaatctaccaggcaagagagtattctcaatttcaaga 285
|||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 441 ggaagtctcaatctaccaggcaagagagtattctcaatgtcaaga 485
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 288
Length of database: 688
Length adjustment: 9
Effective length of query: 279
Effective length of database: 679
Effective search space: 189441
Effective search space used: 189441
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
