Query= MSMg01no173_i13.b1 MSMg01no173_i13.b1 CHROMAT_FILE:
MSMg01no173_i13.b1 PHD_FILE: MSMg01no173_i13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:44:14 2005
(316 letters)
>mm_chr10_117331926_117332641
Length = 716
Score = 526 bits (272), Expect = e-154
Identities = 302/314 (96%), Gaps = 4/314 (1%)
Strand = Plus / Plus
Query: 5 gaattcagagaactgtgactggaaaagacgtgaaaaaagttctgcctgtattggacaggt 64
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcagagaactgtgactagaaaagacgtgaaaaaagttctgcctgtattggacaggt 264
Query: 65 gggtatgtatagactttttctggccatttctcctctaaatgatggagcattgtaactttt 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 gggtatgtatagactttttctggccatttctcctctaaatgatggagcattgtaactttt 324
Query: 125 tatgttacatagtacaaacgacctagagtttatttaaaccataaagaagcatagttatgt 184
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tatgttagatagtacaaacgacctagagtttatttaaaccataaagaagcatagttatgt 384
Query: 185 gttgtctacaac----ctatatagcttggtgtggtggtggctcatgcctgcagctaatcg 240
||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 gttgtctacaagaatgctatatagcttggtgtggtggtggctcatgcctgcagctaatca 444
Query: 241 ttatactgaagaggctgaggcaagggggtcaggatttcaaggtcagcctataccacctaa 300
|||||| ||||||||| |||||| |||||||||| |||||||||||||||||||||||||
Sbjct: 445 ttataccgaagaggctaaggcaaaggggtcaggagttcaaggtcagcctataccacctaa 504
Query: 301 tgagttcaagattc 314
||||||||||||||
Sbjct: 505 tgagttcaagattc 518
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 316
Length of database: 716
Length adjustment: 9
Effective length of query: 307
Effective length of database: 707
Effective search space: 217049
Effective search space used: 217049
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no173_i13.g1 MSMg01no173_i13.g1 CHROMAT_FILE:
MSMg01no173_i13.g1 PHD_FILE: MSMg01no173_i13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:44:14 2005
(440 letters)
>mm_chr10_117519718_117520552
Length = 835
Score = 789 bits (408), Expect = 0.0
Identities = 430/440 (97%), Gaps = 5/440 (1%)
Strand = Plus / Minus
Query: 1 ttaaagaggaaactgctctaccagggtcacagggaggggcacactgtacacagggacagg 60
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 635 ttaaagaggaaactgttctaccagggtcacagggaggggcacactgtacacagggacagg 576
Query: 61 atgtggttttctgttatgaggcatgaagttcacgatggggagaggtcatccgaggcttct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 575 atgtggttttctgttatgaggcatgaagttcacgatggggagaggtcatccgaggcttct 516
Query: 121 gaagaaggtggggactgggtcatgggaggcccagtaggtcatggtgatgcaactagtttc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 515 gaagaaggtggggactgggtcatgggaggcccagtaggtcatggtgatgcaactagtttc 456
Query: 181 tgtaagtcaaatttcataaaccaggtctataaagtactttatagttgtatgtcatgaggt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 tgtaagtcaaatttcataaaccaggtctataaagtactttatagttgtatgtcatgaggt 396
Query: 241 gttccttgatggacctcaaaatagcagcttccttctggattgggtttagaaatatcttaa 300
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 395 gttccttgatggacctcaaaatagcagcttccttctgggttgggtttagaaatatcttaa 336
Query: 301 atctcatcctttcttaatgctctgtgtgtgcgtgtttatattctgtaggctctgtgaatc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 atctcatcctttcttaatgctctgtgtgtgcgtgtttatattctgtaggctctgtgaatc 276
Query: 361 tctgcatatagagtcttgcgcgtgtcggctcagcctgagagacttagagtagagtcggct 420
|||||||||||||||||| |||||| |||||||||||||||||||||||| || ||
Sbjct: 275 tctgcatatagagtcttgtgcgtgttggctcagcctgagagacttagagtcga-----ct 221
Query: 421 gtagagcatcattgggattg 440
||||||||||||||||||||
Sbjct: 220 gtagagcatcattgggattg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 440
Length of database: 835
Length adjustment: 9
Effective length of query: 431
Effective length of database: 826
Effective search space: 356006
Effective search space used: 356006
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
