Query= MSMg01no173_o05.b1 MSMg01no173_o05.b1 CHROMAT_FILE:
MSMg01no173_o05.b1 PHD_FILE: MSMg01no173_o05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:44:38 2005
(674 letters)
>mm_chr10_40311806_40312879
Length = 1074
Score = 1127 bits (583), Expect = 0.0
Identities = 653/683 (95%), Gaps = 15/683 (2%)
Strand = Plus / Minus
Query: 5 gaattcacacatatgccgatcttcagatgttcaggaagtctatggaatctgttcaaagta 64
||||||||||||| || ||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 1069 gaattcacacataagcagatcttcagatgttcaggaagtctatggaatctgttcaaggtg 1010
Query: 65 ccatgtattaaacagtcacgtgctgggctctcctcccgc-----------ttcctccctt 113
|| ||||||||| |||||||||||||||||||||||||| ||||||||||
Sbjct: 1009 ccgtgtattaaatagtcacgtgctgggctctcctcccgcttcctccctttttcctccctt 950
Query: 114 cttcctcccttcttcccttcctcccagcaccctgccgtttccttccctccttctttcctt 173
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 949 cttcctcccttcttcccttcctcccagcaccctgccgtttccttccctccttctttcctt 890
Query: 174 tcctttcttctttcccatctggcttattttcgaggacatgtacctgtggctgtaaaccaa 233
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 889 tcctttcttctttcccatctggcttattttcgaggacatgtacctatggctgtaaaccaa 830
Query: 234 ccaactaaataaaaactggtcttacaaatgccatcatatacgtga-tggcaataccaacc 292
||||||||||||||||||||||||||||| ||||||||||| | | ||||||||||| ||
Sbjct: 829 ccaactaaataaaaactggtcttacaaataccatcatatacat-attggcaataccagcc 771
Query: 293 gacatggtttggttgga-tagccatccttttgcatatactatgcattttctcagcagata 351
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 770 gacatggtttggttggattagccatccttttgcatatactatgcattttctcagcagcta 711
Query: 352 tgtatgctgtgaatagatctggaactaggggagcccacagttcccttcactccaacccca 411
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 710 tgtatgctgtgaatagatctggaactaggggagcccacagttcccttcactccaaccccg 651
Query: 412 gactggacagaaacccatccaagtactcagaggcacccagaggccacagcaggccacgtg 471
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 650 gactggacagaaacccatccaagtactcagaggcaccaagaggccacagcaggccacgtg 591
Query: 472 ccccattttacagagcattctcttctctgcagctccatcggggtgccagcctgagctgac 531
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 590 ccccattttacagagcattctcttctctgcagctccatcggggtgccagcctgagctgac 531
Query: 532 aaataaatgatctccctctgtgttgtgtgacaacagtgtccccaacgaccccttacacaa 591
||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||
Sbjct: 530 aaataaatgatctccctctgtgttgtgtgac-acagtgtccccaacgaccccttatacaa 472
Query: 592 tctgcactccatcctgtcagctgctgagcactgtctgacagaactcccagaagccccgcc 651
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 471 tctgcactccatcctgtcagctgctgagcactgtctgacggaactcccagaagccccgcc 412
Query: 652 ctcaatgctcttcccactctgtt 674
|||||||||||||||||||||||
Sbjct: 411 ctcaatgctcttcccactctgtt 389
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 674
Length of database: 1074
Length adjustment: 10
Effective length of query: 664
Effective length of database: 1064
Effective search space: 706496
Effective search space used: 706496
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no173_o05.g1 MSMg01no173_o05.g1 CHROMAT_FILE:
MSMg01no173_o05.g1 PHD_FILE: MSMg01no173_o05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:44:38 2005
(609 letters)
>mm_chr10_40196538_40197546
Length = 1009
Score = 1116 bits (577), Expect = 0.0
Identities = 586/589 (99%)
Strand = Plus / Plus
Query: 1 cttaatgaagatgaaccagaagagaaaggtgacaaggtacaagcttcttcctgcaacact 60
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 201 cttaatgaagatgaaccagaagagaaaggtgacaaggtacaagcttcttcatgcaacact 260
Query: 61 ggctttcaggaagcaagagcggcagaaagataactgggtgtacacttgaagcatgtattg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ggctttcaggaagcaagagcggcagaaagataactgggtgtacacttgaagcatgtattg 320
Query: 121 aggtttaaactgagcttcctgttttgttttagtcgcccattctagtgccagttgttcctc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aggtttaaactgagcttcctgttttgttttagtcgcccattctagtgccagttgttcctc 380
Query: 181 attttgttaaggcagtgccagccccaccctgctgtacttctccctcccactccactgtcc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 attttgttaaggcagtgccagccccaccctgctgtacttctccctcccactccactgtcc 440
Query: 241 cccagtcctttatgttaagagaatcttagccactccccatcattcctttccagagtcctg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cccagtcctttatgttaagagaatcttagccactccccatcattcctttccagagtcctg 500
Query: 301 actggaagggcttttggttgctttaggagggtgagatattgccctgtgtgccttacagca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 actggaagggcttttggttgctttaggagggtgagatattgccctgtgtgccttacagca 560
Query: 361 cccctcccaccctccaactcccgataactgtttaatttgaagatgttgcacagtttcagt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 cccctcccaccctccaactcccgataactgtttaatttgaagatgttgcacagtttcagt 620
Query: 421 gaactccagggagcattattgtcccgggattgctgtgttatgctttgggaatgctgtgtt 480
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gaactccagggagtattattgtcccgggattgctgtgttatgctttgggaatgctgtgtt 680
Query: 481 ttggtgtttacccgtctcagtcattccagtcacacgtgtgcaaccaggctgtgtacccca 540
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ttggtgtttacccgtctcggtcattccagtcacacgtgtgcaaccaggctgtgtacccca 740
Query: 541 ggtgtgtcaccaatcacacctgtgcaaccaggctgtgtaccccaggtgt 589
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 ggtgtgtcaccaatcacacctgtgcaaccaggctgtgtaccccaggtgt 789
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 39
Number of extensions: 7
Number of successful extensions: 7
Number of sequences better than 10.0: 1
Number of HSP's gapped: 7
Number of HSP's successfully gapped: 1
Length of query: 609
Length of database: 1009
Length adjustment: 10
Effective length of query: 599
Effective length of database: 999
Effective search space: 598401
Effective search space used: 598401
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
