Query= MSMg01no174_e15.b1 MSMg01no174_e15.b1 CHROMAT_FILE:
MSMg01no174_e15.b1 PHD_FILE: MSMg01no174_e15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:45:07 2005
(312 letters)
>mm_chr10_15038197_15038905
Length = 709
Score = 551 bits (285), Expect = e-161
Identities = 302/309 (97%), Gaps = 3/309 (0%)
Strand = Plus / Minus
Query: 4 ggaattcccatcctaaagtattcttttcttagaccttaatcacataataattattaataa 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 ggaattcccatcctaaagtattcttttcttagaccttaatcacataataattattaataa 385
Query: 64 acagcagggagtttaaagtattcttatttctcctactttagttaacatacgtttttctct 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 acagcagggagtttaaagtattcttatttctcctactttagttaacatacgtttttctct 325
Query: 124 gtcttctaaggttgtaaccataattttaacactgtaaatctctgagtgtgccttgagctt 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 gtcttctaaggttgtaaccataattttaacactgtaaatctctgagtgtgccttgagctt 265
Query: 184 acctcagaaaaggagaaaattatgtttttataatgagggtcctacatgcttctgtatccc 243
||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||
Sbjct: 264 acctcagaaaaggagaaaaatatgtttttat---gagggtcctacatgcttctgtatccc 208
Query: 244 cacctgtgctagtttgaatgtgaatggctctgaaaggcgcatatctttgaatgcttgatt 303
|||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||
Sbjct: 207 cacctgtgctagtttgaatgtgaatggctctgaacggcacatatctttgaatgcttgatt 148
Query: 304 tcaagttga 312
| |||||||
Sbjct: 147 taaagttga 139
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 312
Length of database: 709
Length adjustment: 9
Effective length of query: 303
Effective length of database: 700
Effective search space: 212100
Effective search space used: 212100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no174_e15.g1 MSMg01no174_e15.g1 CHROMAT_FILE:
MSMg01no174_e15.g1 PHD_FILE: MSMg01no174_e15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:45:07 2005
(250 letters)
>mm_chr10_14890537_14891186
Length = 650
Score = 453 bits (234), Expect = e-132
Identities = 246/250 (98%)
Strand = Plus / Plus
Query: 1 tctaaattacttgtatctaaaaattcaactcttgcttattcattcatccttagcagtaat 60
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 201 tctaaattacttgtatctaaaaattcaactcttgcttcttcattcatccttagcagtaat 260
Query: 61 ttgagattagtaacttatgcctataatttttcaagggggtaaactggaagttttatgggc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttgagattagtaacttatgcctataatttttcaagggggtaaactggaagttttatgggc 320
Query: 121 ctcttatgtgtaaagctgtgtgggaatgacatattattctctggattactatgaaaaatc 180
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctcttatgtgtaaagctgtgtgagaatgacatattattctctggattactatgaaaaatc 380
Query: 181 tgaaagaaaagtaacaataaagtgataaatttcatcattataattatacattcacaaaat 240
||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||
Sbjct: 381 tgaaagaaaagtaacaataaagtgataaatttcatcaatataattatacgttcacaaaat 440
Query: 241 cattaagtcg 250
||||||||||
Sbjct: 441 cattaagtcg 450
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 250
Length of database: 650
Length adjustment: 9
Effective length of query: 241
Effective length of database: 641
Effective search space: 154481
Effective search space used: 154481
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
