Query= MSMg01no175_e06.b1 MSMg01no175_e06.b1 CHROMAT_FILE:
MSMg01no175_e06.b1 PHD_FILE: MSMg01no175_e06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:46:18 2005
(431 letters)
>mm_chr10_37448234_37449058
Length = 825
Score = 613 bits (317), Expect = e-180
Identities = 367/389 (94%), Gaps = 12/389 (3%)
Strand = Plus / Minus
Query: 48 tttgcatggaaaacttattcacttatttt----tttgtttgtttgtttgtttgttttgtt 103
||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 825 tttgcatggaaaacttattcacttatttttttgtttgtttgtttgtttgtttgttttgtt 766
Query: 104 tttcgagacagggtttctctggatagccctggctgtcctggagctcactttgtagaccag 163
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 765 tttcgagacagggtttctctggatagccctggctgtcctggagctcactttgtagaccag 706
Query: 164 gctggcctcgaattcagaaatccacctacttcagcctcccaagtgcgtggattaaaggcg 223
|||||||||||| |||||||||||||| | |||||||||||||||| |||||||||||||
Sbjct: 705 gctggcctcgaactcagaaatccacctgcctcagcctcccaagtgcttggattaaaggcg 646
Query: 224 tgcgccaccacacccagctagaaaacttattcttaaacatcctaaaaaaaccaatgtata 283
|| |||||||||||||||| ||||||||||||||||||||||||||||| ||||||||
Sbjct: 645 tgtgccaccacacccagctggaaaacttattcttaaacatcctaaaaaa---aatgtata 589
Query: 284 acataatttgata-tttttgtgtggctaatgatgcacaaagcaatttacctcagtggttc 342
||||||||||||| ||||| ||||||||||||| ||||||||||||||||||||||||||
Sbjct: 588 acataatttgatattttttatgtggctaatgattcacaaagcaatttacctcagtggttc 529
Query: 343 tggctcccctctgtctacatttttgaatgtattcttttaaagcttgtgttttggagaagt 402
|||||||| |||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 528 tggctcccttctgcctacatttttgaatgtattcttttaaagcttgtgttttggag---- 473
Query: 403 aatatccaaaataatgttaatggtttggg 431
|||||||||||||||||||||||||||||
Sbjct: 472 aatatccaaaataatgttaatggtttggg 444
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 431
Length of database: 825
Length adjustment: 9
Effective length of query: 422
Effective length of database: 816
Effective search space: 344352
Effective search space used: 344352
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no175_e06.g1 MSMg01no175_e06.g1 CHROMAT_FILE:
MSMg01no175_e06.g1 PHD_FILE: MSMg01no175_e06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:46:19 2005
(284 letters)
>mm_chr10_37370139_37370822
Length = 684
Score = 549 bits (284), Expect = e-161
Identities = 284/284 (100%)
Strand = Plus / Plus
Query: 1 catttttccatttactgtgctgactacagccagtactacacactgaggcatcatagtgca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 catttttccatttactgtgctgactacagccagtactacacactgaggcatcatagtgca 260
Query: 61 gttccccctgacagatacaatgtggaaaccatgatgccttagctcagagtggaaaccgta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gttccccctgacagatacaatgtggaaaccatgatgccttagctcagagtggaaaccgta 320
Query: 121 atcccatttggataattcagtttaagttaatgctgtttttagatactggatttgtgaggt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 atcccatttggataattcagtttaagttaatgctgtttttagatactggatttgtgaggt 380
Query: 181 gagaaatgttataccccaaggacaaagtgaacgaagtgggctgcaatgtactttgaggta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gagaaatgttataccccaaggacaaagtgaacgaagtgggctgcaatgtactttgaggta 440
Query: 241 gtttggtgatggggacttgttgatgatgacatttagttgggtac 284
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gtttggtgatggggacttgttgatgatgacatttagttgggtac 484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 284
Length of database: 684
Length adjustment: 9
Effective length of query: 275
Effective length of database: 675
Effective search space: 185625
Effective search space used: 185625
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
