Query= MSMg01no175_g04.b1 MSMg01no175_g04.b1 CHROMAT_FILE:
MSMg01no175_g04.b1 PHD_FILE: MSMg01no175_g04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:46:27 2005
(481 letters)
>mm_chr10_114226716_114227595
Length = 880
Score = 845 bits (437), Expect = 0.0
Identities = 470/485 (96%), Gaps = 9/485 (1%)
Strand = Plus / Minus
Query: 1 ataattgcctgtgtgtctatggacaaaccttactgggtgtacatttttattttaccaatt 60
|||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||
Sbjct: 680 ataattgcctgtgtgtctatggacaaacattactgggtgtacatttttattttagcaatt 621
Query: 61 tataggactaatatttcttccacctttaatcttttgtttgtatgaagatttataactaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 tataggactaatatttcttccacctttaatcttttgtttgtatgaagatttataactaaa 561
Query: 121 acttctttcccacatattattatgttttatcattttggcagtttagtgagaaaggccaag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 acttctttcccacatattattatgttttatcattttggcagtttagtgagaaaggccaag 501
Query: 181 aaaacaatattttctttttactaatgaaaaaataagtttaggcagttaaatggcatgcca 240
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 500 aaaacaatattttctttttactaatgaaaaaataagtttaagcagttaaatggcatgcca 441
Query: 241 ggtctggtatgttcgagcctagtgctatttgaatgatactttcaacccttcccaaacaat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 ggtctggtatgttcgagcctagtgctatttgaatgatactttcaacccttcccaaacaat 381
Query: 301 catttaaaaaacaaaaccctcttcctttgctttatttcaaaaat--gacccccc--taaa 356
|||||||||||||||||||||||||||||||||||||||||||| | | ||||
Sbjct: 380 catttaaaaaacaaaaccctcttcctttgctttatttcaaaaattaaa-----ctttaaa 326
Query: 357 atgtataaatggtaaaaagtttgtgctccatacttctaaaaacagtgtgaatatttatac 416
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 325 atgtataaatggtaaaaagtttgtgcttcatacttctaaaaacagtgtgaatatttatac 266
Query: 417 ctcatgttttccccagagatagcctatgcaacctaaaagatatggcaacatatagagatt 476
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 265 ctcatgttttccccagagatagccaatgcaacctaaaagatatggcaacatatagagatt 206
Query: 477 ggata 481
|||||
Sbjct: 205 ggata 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 481
Length of database: 880
Length adjustment: 10
Effective length of query: 471
Effective length of database: 870
Effective search space: 409770
Effective search space used: 409770
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no175_g04.g1 MSMg01no175_g04.g1 CHROMAT_FILE:
MSMg01no175_g04.g1 PHD_FILE: MSMg01no175_g04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:46:27 2005
(291 letters)
>mm_chr10_114119702_114120392
Length = 691
Score = 538 bits (278), Expect = e-157
Identities = 287/290 (98%)
Strand = Plus / Plus
Query: 1 aaacaaacagtgctgagaggtgacccaagcttaaatatgtgtgcagttgcatgagctgtt 60
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 201 aaacaaacagtgctgagaggtgacccaagcttaaatatgtgtgcagttgcgtgagctgtt 260
Query: 61 caaagaaaattactggatcagataaacagcctggattgtcttactgttctagtggctaca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 caaagaaaattactggatcagataaacagcctggattgtcttactgttctagtggctaca 320
Query: 121 cattcaaactggtgacatctttttctggcttaaaagtggatgcccactgtatcttcacat 180
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cgttcaaactggtgacatctttttctggcttaaaagtggatgcccactgtatcttcacat 380
Query: 181 gccagaaagaaaattatccctagtacactctccatcactatttttccaaatctactaatc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gccagaaagaaaattatccctagtacactctccatcactatttttccaaatctactaatc 440
Query: 241 ctattgagctatagagccactaaaattaccatattcaactctaattactt 290
||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ctattgagctagagagccactaaaattaccatattcaactctaattactt 490
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 291
Length of database: 691
Length adjustment: 9
Effective length of query: 282
Effective length of database: 682
Effective search space: 192324
Effective search space used: 192324
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
