Query= MSMg01no177_b01.b1 MSMg01no177_b01.b1 CHROMAT_FILE:
MSMg01no177_b01.b1 PHD_FILE: MSMg01no177_b01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:49:33 2005
(662 letters)
>mm_chr10_87546559_87547620
Length = 1062
Score = 1243 bits (643), Expect = 0.0
Identities = 655/659 (99%), Gaps = 2/659 (0%)
Strand = Plus / Minus
Query: 5 gaattcatcctgccac-ccacttcccaggagcctctgggctatgttatatagttaacagg 63
|||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||
Sbjct: 862 gaattcatcctgccacacc-cttcccaggagcctctgggctatgttatatagttaacagg 804
Query: 64 gaaatgtggtccttttggtcactcagaatcaacaatacttagccggacatgctggctctc 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 803 gaaatgtggtccttttggtcactcagaatcaacaatacttagccggacatgctggctctc 744
Query: 124 acctaccatcctaggattctacaggtagaggcagggggatcatgacttcagtaccagtct 183
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 743 atctaccatcctaggattctacaggtagaggcagggggatcatgacttcagtaccagtct 684
Query: 184 cagccatacacagtgaggtcaacctggtcttagatcttgttaccagatggaatgttgtat 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 683 cagccatacacagtgaggtcaacctggtcttagatcttgttaccagatggaatgttgtat 624
Query: 244 ttagtgtgatataaacagaaaccaatcaaagcgccagttgtaaagactagaatatactca 303
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 623 ttagtgtgatataaacagaagccaatcaaagcgccagttgtaaagactagaatatactca 564
Query: 304 aatattcgaattttaaagtggtaattttgagaattcccttcatgctcttgtcacaaacaa 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 aatattcgaattttaaagtggtaattttgagaattcccttcatgctcttgtcacaaacaa 504
Query: 364 agatttaagtcacattaaaagttgacgaatatgcttaagacaatatgcatgatctttttt 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 agatttaagtcacattaaaagttgacgaatatgcttaagacaatatgcatgatctttttt 444
Query: 424 tagttcctcaaaaagatgatttttgaattttgtttaattcctagcaattttggagtcatc 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 tagttcctcaaaaagatgatttttgaattttgtttaattcctagcaattttggagtcatc 384
Query: 484 tgatatctttcttccagaaaaacaatctgatgatatctttcaacattgggttaccaacaa 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 tgatatctttcttccagaaaaacaatctgatgatatctttcaacattgggttaccaacaa 324
Query: 544 gaattgttatatttatacattgattcataattccaggtttcttcacattatttactgtaa 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 gaattgttatatttatacattgattcataattccaggtttcttcacattatttactgtaa 264
Query: 604 agctacattgaatcttcattgttatgcatgttaggaatgtactctcacggatgtcttgc 662
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 agctacattgaatcttcattgttatgcatgttaggaatgtactctcacggatgtcttgc 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 662
Length of database: 1062
Length adjustment: 10
Effective length of query: 652
Effective length of database: 1052
Effective search space: 685904
Effective search space used: 685904
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no177_b01.g1 MSMg01no177_b01.g1 CHROMAT_FILE:
MSMg01no177_b01.g1 PHD_FILE: MSMg01no177_b01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:49:33 2005
(496 letters)
>mm_chr10_87423894_87424789
Length = 896
Score = 944 bits (488), Expect = 0.0
Identities = 494/496 (99%)
Strand = Plus / Plus
Query: 1 ttgacttgtagtcatacaattcacacacaaaccagaggagttatttatgtattcaacatg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttgacttgtagtcatacaattcacacacaaaccagaggagttatttatgtattcaacatg 260
Query: 61 gatgaatcgtcaatggaactacatagtgtgtagctgtgtagttcatttatataaagttca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gatgaatcgtcaatggaactacatagtgtgtagctgtgtagttcatttatataaagttca 320
Query: 121 aagctaggtaacaaacctatggagatagaagttagatgtttgtcccatggagaagacaga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aagctaggtaacaaacctatggagatagaagttagatgtttgtcccatggagaagacaga 380
Query: 181 aactgtacagagggcattagggaataagtgaagtttcgcccctgtgtaacacactatggc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aactgtacagagggcattagggaataagtgaagtttcgcccctgtgtaacacactatggc 440
Query: 241 tttttaaagattcattatgatagtttcttgctatataactcaggacttcctggaacctgt 300
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 441 tttttaaagattcattatgatagtgtcttgctatataactcaggacttcctggaacctgt 500
Query: 301 aatcctcctgtctcagccttttgaatactacaattataggtctgcactaccaatcccagc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aatcctcctgtctcagccttttgaatactacaattataggtctgcactaccaatcccagc 560
Query: 361 cttaaaatggactgtaggttctcctagaggaactcagagttatctagagaaataaaacca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 cttaaaatggactgtaggttctcctagaggaactcagagttatctagagaaataaaacca 620
Query: 421 ttagcctgaacatatattattcagaagatttattatattgctgtacagggtatgggctgg 480
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 621 ttagcctgaacatatattattcagaagattcattatattgctgtacagggtatgggctgg 680
Query: 481 atagtccaacaatggt 496
||||||||||||||||
Sbjct: 681 atagtccaacaatggt 696
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 496
Length of database: 896
Length adjustment: 10
Effective length of query: 486
Effective length of database: 886
Effective search space: 430596
Effective search space used: 430596
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
