Query= MSMg01no177_g16.b1 MSMg01no177_g16.b1 CHROMAT_FILE:
MSMg01no177_g16.b1 PHD_FILE: MSMg01no177_g16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:49:59 2005
(220 letters)
>mm_chr10_102425933_102426553
Length = 621
Score = 315 bits (163), Expect = 1e-90
Identities = 202/215 (93%), Gaps = 3/215 (1%)
Strand = Plus / Plus
Query: 5 gaattcaagagccagtgaacagagtgtggaatttgaggaagaaaatggaggcaggggaca 64
||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcaagaggtagtgaatagagtgtggaatttgaggaagaaaatggaggcaggggaca 264
Query: 65 ttttgtaagctttaattacaaaaatatataattattga-ttaattggttgtgggtcaaaa 123
||||||||| |||||||||||||||||||||||||| | |||||||||||||||||||||
Sbjct: 265 ttttgtaagttttaattacaaaaatatataattatt-agttaattggttgtgggtcaaaa 323
Query: 124 tagcatggaactatttttt-caaattatatggtacctagcagaatgtaagcaacagatca 182
||||||||||||||||||| |||| |||||||||||||||||||||||||| |||||||
Sbjct: 324 tagcatggaactatttttttcaaaccatatggtacctagcagaatgtaagcagcagatca 383
Query: 183 gagggagtcacaacgacctaagtacgattgagaaa 217
||||||||||||||||||| |||| |||||||||
Sbjct: 384 gagggagtcacaacgacctgagtataattgagaaa 418
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 5
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 220
Length of database: 621
Length adjustment: 9
Effective length of query: 211
Effective length of database: 612
Effective search space: 129132
Effective search space used: 129132
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no177_g16.g1 MSMg01no177_g16.g1 CHROMAT_FILE:
MSMg01no177_g16.g1 PHD_FILE: MSMg01no177_g16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:49:59 2005
(278 letters)
>mm_chr10_102466317_102466994
Length = 678
Score = 538 bits (278), Expect = e-157
Identities = 278/278 (100%)
Strand = Plus / Minus
Query: 1 aatggctttagtagactcctcgaggtcaactgcattaccaaccacatcatggtaatatcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 478 aatggctttagtagactcctcgaggtcaactgcattaccaaccacatcatggtaatatcc 419
Query: 61 ttagtttaaatacaatttccaccacaaaggagtctcatattatgaaaggtaaaaacatca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 418 ttagtttaaatacaatttccaccacaaaggagtctcatattatgaaaggtaaaaacatca 359
Query: 121 tgtgtcagaatatctctgactagcaaaacataggcattaaaaagaataggacatttataa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 358 tgtgtcagaatatctctgactagcaaaacataggcattaaaaagaataggacatttataa 299
Query: 181 tcaagcaggtccattgtatagcatgaatgaaacaaagaggggtcaggatgtagtatgtga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 298 tcaagcaggtccattgtatagcatgaatgaaacaaagaggggtcaggatgtagtatgtga 239
Query: 241 gagtagttatgcagggtaagggggcaacagtttataga 278
||||||||||||||||||||||||||||||||||||||
Sbjct: 238 gagtagttatgcagggtaagggggcaacagtttataga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 278
Length of database: 678
Length adjustment: 9
Effective length of query: 269
Effective length of database: 669
Effective search space: 179961
Effective search space used: 179961
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
