NCCTCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCG
CGGAATTCACACCCTGCCGAAAGTTCCTTTCATGTGCTCCACTGAGATGA
CTGCATGCTCTGGCTTGTCCCTGTTCTGCCGCTGCTCCTGCCTCACAGGT
CTCCCACTGTGACTAAATGTCAGTTTTCATCATCAAGTGCGAGCAGGGGA
TAAAAACAACCAGTTTCTTAAAGCACCAACTGTGCAAATTGCTGCCCAGA
GTCCGTAATAGTTTCCCTTGTTACTTCGGACAGCAAGCGAGGGAGGGGAA
TAAGAGGGAAGGGAACAAAGGGTGGCCTCTCGGCCTCACTTACAGGCCAT
TTTTGTTCGAGATATTTTAGTGTTGGTGGTGCCGTTCCATTTTGAGAGCT
GGTTAGCCTAAGGACCCTGCTAGGTAGAAAATGTGATTAAAGCTAGATAA
AGCTTTATTTAAAAATATTAGAGTAATTTCCTTACTTTGGTATCACTGTG
ACCAAAATACTTGTCAGAAATAACACCCAGGAAGGAGTTACTTTGGCTAA
TGGCTTCAGGAAGATCTGCTCACATTTACTAACTCCCCATGTGTGGGGAG
AGAATCATGACTCTTGTATAAAGACCTTCACTTGGGGAAGCAGCACAGAG
AGAGGGGATGTAGAAGGTGCCAGATACACCTCCCAGTGGCCTAGTTCCTC
CA

NACCGATGACXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCCTCTGAAGAAACAGACTTG
GAGGAGGAAGCAGCTCATTATGAGACACAAGGGTACCAGCCAGATAAAAT
GCTAGCTAATCAGTTAAGGAAAAAGCCAAAAGCGGCTGGCGAAGACCAGC
ATGCTGCTCAGCCTCCGGGCAGTCGGCTTCAAGGTCATAGTGCACTTCCG
CCCTATGCGGAGCCCCCGCCCTGCGTAGTGCGTCAGCCCTGCGCAGAGAG
GCAATGCGCAGACTCCTTCATTCCAAAGGAGGAACAAAGGAAAATGCAAC
AGGCATTTCCGGTCTTTGAAGGAGCCGAGGGTGGGCGTGTCCACGCTCCG
GTAGAATATGTGCAGATTAAAGAGCTTGCCGAGTCGGTCCGTAAATATGG
AACCAATGCTAATTTTACCTTGGTGCAGTTAGACAGTCTTGCTGGCATGG
CACTAACTCCTGCCGACTGGCAAATGATTGCAAAAGCCGCTCTCCCTAGT
ATGGGCAAATATATGGAATGGAGAGCTCTATGGCAAGAGGCTGCACAAGC
GCAGGCCCGAGCAAACGCTGCTGCTTTGACTCCAGAGCAGAGAGATTGGA
CTTTTGACTTGTTAACGGGTCAGGGAGCTTATACTGCTGATCAAACAAAC
TACN

Query= MSMg01no177_i04.b1 MSMg01no177_i04.b1 CHROMAT_FILE:
MSMg01no177_i04.b1 PHD_FILE: MSMg01no177_i04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:50:05 2005
         (616 letters)



>mm_chr10_122079391_122080407
          Length = 1017

 Score = 1085 bits (561), Expect = 0.0
 Identities = 603/621 (97%), Gaps = 11/621 (1%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattcacaccctgccgaaagttcctttcatgtgctccactgagatgactgcatgctctg 64
           ||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 634 gaattcacaccctgtggaaagttcctttcatgtgctccactgagatgactgcatgctctg 575

                                                                       
Query: 65  gcttgtccctgttctgccgctgctcctgcctcacaggtctcccactgtgactaaatgtca 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 574 gcttgtccctgttctgccgctgctcctgcctcacaggtctcccactgtgactaaatgtca 515

                                                                       
Query: 125 gttttcatcatcaagtgcgagcaggggataaaaacaaccagtttcttaaagcaccaactg 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 514 gttttcatcatcaagtgcgagcaggggataaaaacaaccagtttcttaaagcaccaactg 455

                                                                       
Query: 185 tgcaaattgctgcccagagtccgtaatagtttcccttgttact-tcggacagcaagcgag 243
           ||||||||||||||||||||||||||||||||||||||||||| | |||||||||| |||
Sbjct: 454 tgcaaattgctgcccagagtccgtaatagtttcccttgttactgt-ggacagcaagtgag 396

                                                                       
Query: 244 ggaggggaataagagggaagggaacaaagggtggcctctcggcctcacttacaggccatt 303
           ||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 395 ggaggggaacaagagggaagggaacaaagggtggcctcgcggcctcacttacaggccatt 336

                                                                       
Query: 304 tttgttcgagatattttagtgttggtggtgccgttccattttgagagctggttagcctaa 363
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 tttgttcgagatattttagtgttggtggtgccgttccattttgagagctggttagcctaa 276

                                                                       
Query: 364 ggaccctgctaggtagaaaatgtgattaaagctagataaagctttattt-aaaaatatta 422
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 275 ggaccctgctaggtagaaaatgtgattaaagctagataaagctttatttaaaaaatatta 216

                                                                       
Query: 423 gagtaatttccttactttggtatcactgtgaccaaaatacttgtcagaaataacacccag 482
           ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |
Sbjct: 215 gagtaatttccttactttggtatcactgtgaccaaaatatttgtcagaaataacacccgg 156

                                                                       
Query: 483 gaaggagttactttggctaatggcttcaggaagatctgctcac-------a-tttactaa 534
           |||||||||||||||||||||||||||||||||||||||||||       | ||||||||
Sbjct: 155 gaaggagttactttggctaatggcttcaggaagatctgctcacgtttactagtttactaa 96

                                                                       
Query: 535 ctccccatgtgtggggagagaatcatgactcttgtataaagaccttcacttggggaagca 594
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 95  ctccccatgtgtggggagagaatcatgactcttgtataaagaccttcacttggggaagca 36

                                
Query: 595 gcacagagagaggggatgtag 615
           |||||||||||||||||||||
Sbjct: 35  gcacagagagaggggatgtag 15


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 616
Length of database: 1017
Length adjustment: 10
Effective length of query: 606
Effective length of database: 1007
Effective search space:   610242
Effective search space used:   610242
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)