Query= MSMg01no179_b11.b1 MSMg01no179_b11.b1 CHROMAT_FILE:
MSMg01no179_b11.b1 PHD_FILE: MSMg01no179_b11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:52:00 2005
(350 letters)
>mm_chr10_110109931_110110680
Length = 750
Score = 677 bits (350), Expect = 0.0
Identities = 350/350 (100%)
Strand = Plus / Plus
Query: 1 gaaatatttttaaagcataagacaactaccaaggtagagaaaatttgaaggaaaaatact 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gaaatatttttaaagcataagacaactaccaaggtagagaaaatttgaaggaaaaatact 260
Query: 61 caagggggtgtgcaaaaggctcaattttcaccctaaggctttttctgatgtgaatataga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 caagggggtgtgcaaaaggctcaattttcaccctaaggctttttctgatgtgaatataga 320
Query: 121 gtagtgcagtcactttagaagactgtttggcagtgcctactaaagccaagctacccacac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gtagtgcagtcactttagaagactgtttggcagtgcctactaaagccaagctacccacac 380
Query: 181 cttacagtcaagcacttctgccctcatctaatactcagaaatagacatcaaaatccacct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cttacagtcaagcacttctgccctcatctaatactcagaaatagacatcaaaatccacct 440
Query: 241 agagaaaacgtgcataatagcaatatccctaatagcccaaattggaggcaactaatattt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 agagaaaacgtgcataatagcaatatccctaatagcccaaattggaggcaactaatattt 500
Query: 301 ccattaaataatagagtggcaaatcatttgtattatagttatacattgtg 350
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ccattaaataatagagtggcaaatcatttgtattatagttatacattgtg 550
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 350
Length of database: 750
Length adjustment: 9
Effective length of query: 341
Effective length of database: 741
Effective search space: 252681
Effective search space used: 252681
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no179_b11.g1 MSMg01no179_b11.g1 CHROMAT_FILE:
MSMg01no179_b11.g1 PHD_FILE: MSMg01no179_b11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:52:01 2005
(178 letters)
>mm_chr10_110202928_110203507
Length = 580
Score = 327 bits (169), Expect = 3e-94
Identities = 177/181 (97%), Gaps = 4/181 (2%)
Strand = Plus / Minus
Query: 1 gtgggtgtggcactgagagactctctcccttccaagacagccctacccccgcccggtccc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 gtgggtgtggcactgagagactctctcccttccaagacagccctacccccgcccggtccc 321
Query: 61 ccaaccctgagcgttccttgcctgcttacctgtag---actttcatctccacccttcaga 117
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 320 ccaaccctgagcgttccttgcctgcttacctgtagacaactttcatctccacccttcaga 261
Query: 118 gaagtaggcggtgggagggggaagaaaggggaaagaacactcagacagtctgcttggatg 177
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 gaagtaggcgg-gggagggggaagaaaggggaaagaacactcagacagtctgcttggatg 202
Query: 178 t 178
|
Sbjct: 201 t 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 4
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 178
Length of database: 580
Length adjustment: 8
Effective length of query: 170
Effective length of database: 572
Effective search space: 97240
Effective search space used: 97240
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
