Query= MSMg01no179_i06.b1 MSMg01no179_i06.b1 CHROMAT_FILE:
MSMg01no179_i06.b1 PHD_FILE: MSMg01no179_i06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:52:33 2005
(277 letters)
>mm_chr10_107936528_107937204
Length = 677
Score = 497 bits (257), Expect = e-145
Identities = 269/273 (98%)
Strand = Plus / Minus
Query: 5 gaattctttcacaggcacatagcatgttctgagcagcatccatgctgacctcaaggaagc 64
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 477 gaattctttcacaggcaaatagcatgttctgagcagcatccatgctgacctcaaggaagc 418
Query: 65 aaagccacaaaccagaatagcatctgtctgtctgtctctgcaaagctaaaaaatcatggc 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 417 aaagccacaaaccagaatagcatctgtctgtctgtctctgcaaagctaaaaaatcatggc 358
Query: 125 ttcactcttccagtcaaggaagcaacgaacaggaaggagccagtgagttcctacgactgc 184
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 357 ttcactcttccagtcaaggaagcaacgaacacgaaggagccagtgagttcctacgactgc 298
Query: 185 atctagcatagcataaccgtggtgttctctgtgtgtgcgtgtgcaagtgtgaaagtgtat 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 297 atctagcatagcataaccgtggtgttctctgtgtgtgcgtgtgcaagtgtgaaagtgtat 238
Query: 245 gcacgagtcttatgtgtggcgcacgcctttgtt 277
||||||||||||||||||| ||| |||||||||
Sbjct: 237 gcacgagtcttatgtgtggtgcatgcctttgtt 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 277
Length of database: 677
Length adjustment: 9
Effective length of query: 268
Effective length of database: 668
Effective search space: 179024
Effective search space used: 179024
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no179_i06.g1 MSMg01no179_i06.g1 CHROMAT_FILE:
MSMg01no179_i06.g1 PHD_FILE: MSMg01no179_i06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:52:33 2005
(229 letters)
>mm_chr10_107778939_107779566
Length = 628
Score = 389 bits (201), Expect = e-113
Identities = 223/231 (96%), Gaps = 3/231 (1%)
Strand = Plus / Plus
Query: 1 actgaac--tgtcttgacatttatttgcaaggtgggttttttttttctcatccttgtaca 58
||||||| ||||||||||||||||||||||||||| |||||||||| ||||||||||||
Sbjct: 199 actgaactatgtcttgacatttatttgcaaggtggg-tttttttttcccatccttgtaca 257
Query: 59 agccaaagaatttgaacctgaaagaagctgtgtcttgcccaaaggctgtcctgacagaac 118
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 agccaaagaatttgaacctgaaagaagctgtgtcttgcccaaaggctgtcctgacagaac 317
Query: 119 atggccttgacttctgatctgcttggacgcagggctcacaggccggttatcattgttgga 178
||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||
Sbjct: 318 atggccttgacttctgatctgtttggacgcagggctcacaggttggttatcattgttgga 377
Query: 179 aacaccttgggtccgttctattaaaagtaactttgcagagaatctaagctg 229
||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 378 aacaccttgggtccgttctattagaagtaactttgcagagaatctaagctg 428
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 229
Length of database: 628
Length adjustment: 9
Effective length of query: 220
Effective length of database: 619
Effective search space: 136180
Effective search space used: 136180
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
