Query= MSMg01no180_l19.b1 MSMg01no180_l19.b1 CHROMAT_FILE:
MSMg01no180_l19.b1 PHD_FILE: MSMg01no180_l19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:54:03 2005
(234 letters)
>mm_chr10_12936845_12937478
Length = 634
Score = 445 bits (230), Expect = e-129
Identities = 233/234 (99%)
Strand = Plus / Plus
Query: 1 tgggaagtgaagggttggctctggagtctataattttacctatattatagaccaaaacat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgggaagtgaagggttggctctggagtctataattttacctatattatagaccaaaacat 260
Query: 61 gtcctcagctgagctttcattcaaagggggaggtctctgttatcttcttgtgactatcct 120
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gtcctcagctgagctttcgttcaaagggggaggtctctgttatcttcttgtgactatcct 320
Query: 121 ggcaggagaggagatattttaaagagagacatccgtactatcagactactgaaacaataa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ggcaggagaggagatattttaaagagagacatccgtactatcagactactgaaacaataa 380
Query: 181 accacaaaaaattataattgccctaggaatcgcatactgggtaagggcaaggcc 234
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 accacaaaaaattataattgccctaggaatcgcatactgggtaagggcaaggcc 434
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 234
Length of database: 634
Length adjustment: 9
Effective length of query: 225
Effective length of database: 625
Effective search space: 140625
Effective search space used: 140625
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no180_l19.g1 MSMg01no180_l19.g1 CHROMAT_FILE:
MSMg01no180_l19.g1 PHD_FILE: MSMg01no180_l19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:54:03 2005
(288 letters)
>mm_chr10_13073391_13074079
Length = 689
Score = 520 bits (269), Expect = e-152
Identities = 284/289 (98%), Gaps = 1/289 (0%)
Strand = Plus / Minus
Query: 1 atccttagggtcacatcactgggttaccatggctgcaaacgtatt-aaaacccatgacag 59
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 489 atccttagggtcacatcactgggttaccatggctgcaaacgtattaaaaacccatgacag 430
Query: 60 aagcaaaagagaattttatcttgaattcacatattgttttatgttcatccacactctttt 119
|||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 429 aagcaaaagataattttatcttgagttcacatattgttttatgttcatccacactctttt 370
Query: 120 ctgttgctgtcatcatcatcttcttcttcatcatggcactccagtgatatttggctcttt 179
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 ctgttgccgtcatcatcatcttcttcttcatcatggcactccagtgatatttggctcttt 310
Query: 180 cagaaagaatcagttgcatgaggaaaaattcataggctttgagcaataaaacatctatca 239
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 309 cagaaagaatcagttgcatgagggaaaattcataggctttgagcaataaaacatctatca 250
Query: 240 tggggtgaaatccataactgccgaccaggtgatggatggaatacaaccc 288
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 tggggtgaaatccataactgccgaccaggtgatggatggaatacaaccc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 288
Length of database: 689
Length adjustment: 9
Effective length of query: 279
Effective length of database: 680
Effective search space: 189720
Effective search space used: 189720
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
