Query= MSMg01no181_f18.b1 MSMg01no181_f18.b1 CHROMAT_FILE:
MSMg01no181_f18.b1 PHD_FILE: MSMg01no181_f18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:54:48 2005
(265 letters)
>mm_chr10_80008634_80009296
Length = 663
Score = 470 bits (243), Expect = e-137
Identities = 259/265 (97%), Gaps = 2/265 (0%)
Strand = Plus / Plus
Query: 1 cagagggaaagactagaggcatggccaggggtggattctgcctccaattccccagtgagg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cagagggaaagactagaggcatggccaggggtggattctgcctccaattccccagtgagg 260
Query: 61 gactgccttgggcataagcaccttgccgtgtttgtataagctcgggctcattctcagtac 120
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ggctgccttgggcataagcaccttgccgtgtttgtataagctcgggctcattctcagtac 320
Query: 121 taggagacagaacatactacagggccaacacagaatcctactggggacaatatgagcaga 180
||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 321 taggagaca--acatactacagggccaaaacagaatcctactggggacaatatgagcaga 378
Query: 181 gtataaggctcatggtctctcagagtacagggtacctggagtgatgggctgtgggcgatg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 gtataaggctcatggtctctcagagtacagggtacctggagtgatgggctgtgggcgatg 438
Query: 241 cgcttgggattgacggtggtggttg 265
|||||||| |||||||||||||||
Sbjct: 439 cgcttgggggtgacggtggtggttg 463
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 265
Length of database: 663
Length adjustment: 9
Effective length of query: 256
Effective length of database: 654
Effective search space: 167424
Effective search space used: 167424
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no181_f18.g1 MSMg01no181_f18.g1 CHROMAT_FILE:
MSMg01no181_f18.g1 PHD_FILE: MSMg01no181_f18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:54:48 2005
(214 letters)
>mm_chr10_80122065_80122678
Length = 614
Score = 381 bits (197), Expect = e-110
Identities = 206/209 (98%)
Strand = Plus / Minus
Query: 5 gaattccacactgatcgtgtaattctaacacaaagaagctctgcagcttccggtccgaat 64
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 340 gaattccacactgatcgtgtaattctaacacaaagaagctctgcagcttccgatccgaat 281
Query: 65 gcctgctctgactccatactgtcctacttgtagagttgtacagacttcgttccgtctgct 124
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 280 gcctgctctgactctatactgtcctacttgtagagttgtacagacttcgttccgtctgct 221
Query: 125 taattttggtatgtaatgttttaatttatttgtaagtatttaaaatatataataaagttt 184
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 220 taattttggtatgtaaggttttaatttatttgtaagtatttaaaatatataataaagttt 161
Query: 185 atttataaaaaagcaaaactaaaacccgg 213
|||||||||||||||||||||||||||||
Sbjct: 160 atttataaaaaagcaaaactaaaacccgg 132
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 214
Length of database: 614
Length adjustment: 9
Effective length of query: 205
Effective length of database: 605
Effective search space: 124025
Effective search space used: 124025
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
