Query= MSMg01no181_i04.b1 MSMg01no181_i04.b1 CHROMAT_FILE:
MSMg01no181_i04.b1 PHD_FILE: MSMg01no181_i04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:54:59 2005
(314 letters)
>mm_chr10_38877018_38877732
Length = 715
Score = 507 bits (262), Expect = e-148
Identities = 299/312 (95%), Gaps = 3/312 (0%)
Strand = Plus / Minus
Query: 5 gaattcagccactcctgtaaggagaaaataatcctctttagaaatgtatgacataaaatg 64
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 515 gaattcagccactcctgtaaggag-aaataatcctctttagaaatgtatgacataaaatg 457
Query: 65 tgaggatatatacctggtattcactttctgatttattctccgtctgactaaccactgggt 124
|||||||||| || ||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 456 tgaggatatagacatggtattcactttctgatttattctccatctgactaaccactgggt 397
Query: 125 cctcaccctcatcaccaaacatttgcaaacctgattctggactctctgggtcttagttct 184
|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 396 cctcaccctcatcaccaaacatttgcaaacctgattctgggctctctgggtcttagttca 337
Query: 185 tgtctgacttagaccatctgaaatgacaatgggctgacaataatccagaatgacaaataa 244
||||||||| |||||||||||||||||||||| ||| ||||||||||| |||||||||||
Sbjct: 336 tgtctgactcagaccatctgaaatgacaatggactggcaataatccaggatgacaaataa 277
Query: 245 tttaggacaca--acatttctagcaaaagccaagaactcagtactagtcaccacagggaa 302
||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 276 tttaggacacataacatttctagtaaaagccaagaactcagtactagtcaccacagggaa 217
Query: 303 gttcaagtggga 314
||||||||||||
Sbjct: 216 gttcaagtggga 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 314
Length of database: 715
Length adjustment: 9
Effective length of query: 305
Effective length of database: 706
Effective search space: 215330
Effective search space used: 215330
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no181_i04.g1 MSMg01no181_i04.g1 CHROMAT_FILE:
MSMg01no181_i04.g1 PHD_FILE: MSMg01no181_i04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:54:59 2005
(283 letters)
>mm_chr10_38718556_38719239
Length = 684
Score = 437 bits (226), Expect = e-127
Identities = 241/246 (97%), Gaps = 1/246 (0%)
Strand = Plus / Plus
Query: 1 ggcaggagtgcattgtctcaaaacaacaacaacaatatcagcacacacaagttctacaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 103 ggcaggagtgcattgtctcaaaacaacaacaacaatatcagcacacacaagttctacaag 162
Query: 61 tgattcagtagagagcagttggtcaaaatgaccatgtgactgtaaaaactgcttaaaagg 120
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 163 tgattcagtagagagaagttggtcaaaatgaccatgtgactgtaaaaactgcttaaaagg 222
Query: 121 gacatttgaccactcaattatttcacatattaataacctaaatatttttaaatgctaggt 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 223 aacatttgaccactcaattatttcacatattaataacctaaatatttttaaatgctaggt 282
Query: 181 atattttt-aaagactattctatggagtgcaaaggagaagttttacatattttattcatt 239
||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 283 ttattttttaaagactattctttggagtgcaaaggagaagttttacatattttattcatt 342
Query: 240 tcagcc 245
||||||
Sbjct: 343 tcagcc 348
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 3
Number of HSP's successfully gapped: 1
Length of query: 283
Length of database: 684
Length adjustment: 9
Effective length of query: 274
Effective length of database: 675
Effective search space: 184950
Effective search space used: 184950
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
