Query= MSMg01no181_n01.b1 MSMg01no181_n01.b1 CHROMAT_FILE:
MSMg01no181_n01.b1 PHD_FILE: MSMg01no181_n01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:55:22 2005
(673 letters)
>mm_chr10_123728086_123729158
Length = 1073
Score = 1147 bits (593), Expect = 0.0
Identities = 651/671 (97%), Gaps = 2/671 (0%)
Strand = Plus / Plus
Query: 5 gaattctattttatcaccttcattattaataatttaagtggtttagcctctgggtacaca 64
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 203 gaattctattttagcaccttcattattaataatttaagtggtttagcctctgggtacaca 262
Query: 65 gcaatagattaataactacatccatagtggtaaaaatacaacataaactttagcaagtga 124
| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 263 gtaatagattaataactacatccatagtggtaaaaatataacataaactttagcaagtga 322
Query: 125 atgtgcaaaaggggatttggaagatttgtaaaagtatgtactgtaaaagcatgaggtctt 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 atgtgcaaaaggggatttggaagatttgtaaaagtatgtactgtaaaagcatgaggtctt 382
Query: 185 aacatcccatccccggaatccatacatacggcagacatacaacaggagtgcctgtaaccc 244
||||||||||||| |||||||||||||| |||||||||||| |||||||| |||||||||
Sbjct: 383 aacatcccatccctggaatccatacataaggcagacatacagcaggagtgtctgtaaccc 442
Query: 245 ccacactccaagaaggggatgggaagccaagacagaagaatctagaagtttggaggtcag 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 ccacactccaagaaggggatgggaagccaagacagaagaatctagaagtttggaggtcag 502
Query: 305 ctggtatagcttataaagcatagaacaccaaaaaattttgttttaaacaatatggaatat 364
||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||| |
Sbjct: 503 ctggtatagcttataaaacatagaacaccaagaaattttgttttaaacaatatggaatgt 562
Query: 365 aagaactgatactcaaggtagtcttctgttttcaacatgagtacagtgtcactgtatgct 424
||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 aaggaccgatactcaaggtagtcttctgttttcaacatgagtacagtgtcactgtatgct 622
Query: 425 tccattcacagactaacatgtacacacacacacacacacacacacacacacacaaacaca 484
|||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||
Sbjct: 623 tccattcacagactaacatgtatacacacacacacacacacacacacacacacacacaca 682
Query: 485 caacactg--caaaggatcatgagcatactacggcttctttagtctagaataaatgaacg 542
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 683 caacactgtgcaaaggatcatgagcatactacggcttctttagtctagaataaatgaacg 742
Query: 543 tttcacaattcaatacacttgtgacttttttgtagtgtatttgtgtgcatatgcctgcag 602
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 743 tttcacaattcaatacacttgtgacttttttgtagtgtatttgtgtgcatatgcctgcag 802
Query: 603 gtgtacttttctgtcagtgatgaaagaggtctacatggctgctttccaccaacactcttg 662
|||||||||||||||||| || |||||| |||||||||||||||||||||| ||||||||
Sbjct: 803 gtgtacttttctgtcagttataaaagagatctacatggctgctttccaccaccactcttg 862
Query: 663 attgtgtggat 673
|||||||||||
Sbjct: 863 attgtgtggat 873
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 51
Number of extensions: 9
Number of successful extensions: 9
Number of sequences better than 10.0: 1
Number of HSP's gapped: 4
Number of HSP's successfully gapped: 1
Length of query: 673
Length of database: 1073
Length adjustment: 10
Effective length of query: 663
Effective length of database: 1063
Effective search space: 704769
Effective search space used: 704769
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no181_n01.g1 MSMg01no181_n01.g1 CHROMAT_FILE:
MSMg01no181_n01.g1 PHD_FILE: MSMg01no181_n01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:55:22 2005
(103 letters)
>mm_chr10_123860669_123861169
Length = 501
Score = 168 bits (87), Expect = 7e-47
Identities = 99/103 (96%), Gaps = 2/103 (1%)
Strand = Plus / Minus
Query: 1 ccttctgcagctggctaaactaccaccaagtgttttacaaacatattctacttaagagtc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ccttctgcagctggctaaactaccaccaagtgttttacaaacatattctacttaagagtc 242
Query: 61 tttcacacattgttgactgttgttttgcttttgatttttgttt 103
||||||| |||||| ||||||||||||||| |||||||||||
Sbjct: 241 tttcacatgttgttg-ctgttgttttgcttt-gatttttgttt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 2
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 103
Length of database: 501
Length adjustment: 8
Effective length of query: 95
Effective length of database: 493
Effective search space: 46835
Effective search space used: 46835
X1: 6 (11.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 6 (12.4 bits)
S2: 6 (12.3 bits)
|
