MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	MSMg01-182O23
Chromosome	10 (Build37)
Map Location	38,818,499 - 38,818,690
singlet/doublet	singlet
Overlap gene	Lama4
Upstream gene	LOC100040915
Downstream gene	1700025K23Rik, Tube1, EG624165, LOC100040964, Fyn, LOC629337, Traf3ip2, LOC667964, EG667970, E130307A14Rik, Rev3l, EG666304, LOC213332, 4930547M16Rik, LOC667982, 2010001E11Rik, LOC667994, LOC100041085, BC021785, AI317395, EG666342, Slc16a10
Link	Open Mouse BAC browser

Click to get alignment info.

name	LOC100040915 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040915
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 Proteins pseudo : _no_value

name	Lama4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:16775 MGI:109321
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	1700025K23Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66337 MGI:1913587
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Tube1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:71924 MGI:1919174
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG624165 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:624165 MGI:3647945
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 mRNAs, 1440 ESTs, 1 Protein pseudo : _no_value

name	LOC100040964 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040964
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	Fyn (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:14360 MGI:95602
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC629337 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:629337
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 24 Proteins pseudo : _no_value

name	Traf3ip2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:103213 MGI:2143599
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC667964 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:667964
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 ESTs, 2 Proteins pseudo : _no_value

name	EG667970 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:667970 MGI:3643313
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	E130307A14Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:327744 MGI:3036287
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 6 ESTs

name	Rev3l (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:19714 MGI:1337131
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG666304 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:666304 MGI:3644140
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 16 ESTs pseudo : _no_value

name	LOC213332 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:213332
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 65 ESTs, 7 Proteins pseudo : _no_value

name	4930547M16Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:75299 MGI:1922549
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 4 ESTs

name	LOC667982 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:667982
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins pseudo : _no_value

name	2010001E11Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:72045 MGI:1919295
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 4 Proteins

name	LOC667994 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:667994
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 21 Proteins pseudo : _no_value

name	LOC100041085 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041085
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 7 Proteins pseudo : _no_value

name	BC021785 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:215928 MGI:2446139
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	AI317395 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:215929 MGI:2143575
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG666342 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:666342 MGI:3643695
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 13 mRNAs, 238 ESTs, 25 Proteins

name	Slc16a10 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:72472 MGI:1919722
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Lama4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142367454 GeneID:16775 MGI:109321
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : laminin, alpha 4 transcript_id : NM_010681.2

name	1700025K23Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:34304029 GeneID:66337 MGI:1913587
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 1700025K23 gene transcript_id : NM_183254.1

name	Tube1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:110625787 GeneID:71924 MGI:1919174
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : epsilon-tubulin 1 transcript_id : NM_028006.2

name	LOC100040964 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149260691 GeneID:100040964
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical protein LOC100040964 transcript_id : XM_001475573.1

name	Fyn (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6679878 GeneID:14360 MGI:95602
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Fyn proto-oncogene transcript_id : NM_008054.1

name	Traf3ip2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118129914 GeneID:103213 MGI:2143599
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Traf3 interacting protein 2 transcript_id : NM_134000.3

name	EG667970 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94388034 GeneID:667970 MGI:3643313
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : predicted gene, EG667970 transcript_id : XM_993616.1

name	E130307A14Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149260694 GeneID:327744 MGI:3036287
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 6 ESTs product : RIKEN cDNA E130307A14 gene transcript_id : XM_001475662.1

name	Rev3l (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142384575 GeneID:19714 MGI:1337131
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : REV3-like, catalytic subunit of DNA polymerase zeta RAD54 like (S. cerevisiae) transcript_id : NM_011264.2

name	4930547M16Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149260727 GeneID:75299 MGI:1922549
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs product : RIKEN cDNA 4930547M16 gene, transcript variant 1 transcript_id : XM_001476789.1

name	4930547M16Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149260729 GeneID:75299 MGI:1922549
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs product : RIKEN cDNA 4930547M16 gene, transcript variant 2 transcript_id : XM_001476807.1

name	2010001E11Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94388038 GeneID:72045 MGI:1919295
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 4 Proteins product : RIKEN cDNA 2010001E11 gene transcript_id : XM_125582.4

name	BC021785 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802987 GeneID:215928 MGI:2446139
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cDNA sequence BC021785 transcript_id : NM_001001489.2

name	AI317395 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142365883 GeneID:215929 MGI:2143575
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : expressed sequence AI317395 transcript_id : NM_144821.3

name	EG666342 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149260732 GeneID:666342 MGI:3643695
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 13 mRNAs, 237 ESTs, 25 Proteins product : predicted gene, EG666342 transcript_id : XM_986849.2

name	Slc16a10 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142349884 GeneID:72472 MGI:1919722
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : solute carrier family 16 (monocarboxylic acid transporters), member 10 transcript_id : NM_028247.2

name	Lama4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:46275826 GeneID:16775 MGI:109321
definition	GO_component : GO:0005605 - basal lamina [Evidence IDA]; GO:0005604 - basement membrane [Evidence IDA]; GO:0005578 - extracellular matrix (sensu Metazoa) [Evidence IEA]; GO:0005606 - laminin-1 [Evidence IEA] GO_function : GO:0005201 - extracellular matrix structural constituent [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]; GO:0005102 - receptor binding [Evidence IEA] GO_process : GO:0001568 - blood vessel development [Evidence IMP]; GO:0007155 - cell adhesion [Evidence IEA]; GO:0030155 - regulation of cell adhesion [Evidence IEA]; GO:0030334 - regulation of cell migration [Evidence IEA]; GO:0045995 - regulation of embryonic development [Evidence IEA] codon_start : 1 exception : mismatches in translation note : laminin [a]4 product : laminin, alpha 4 protein_id : NP_034811.1

name	1700025K23Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:34304030 CCDS:CCDS23786.1 GeneID:66337 MGI:1913587
definition	codon_start : 1 product : hypothetical protein LOC66337 protein_id : NP_899077.1

name	Tube1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:58037275 CCDS:CCDS23787.1 GeneID:71924 MGI:1919174
definition	GO_component : GO:0005874 - microtubule [Evidence IEA]; GO:0043234 - protein complex [Evidence IEA] GO_function : GO:0005525 - GTP binding [Evidence IEA]; GO:0003924 - GTPase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0005198 - structural molecule activity [Evidence IEA] GO_process : GO:0007018 - microtubule-based movement [Evidence IEA]; GO:0051258 - protein polymerization [Evidence IEA] codon_start : 1 product : epsilon-tubulin 1 protein_id : NP_082282.1

name	LOC100040964 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149260692 GeneID:100040964
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001475623.1

name	Fyn (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6679879 CCDS:CCDS23788.1 GeneID:14360 MGI:95602
definition	GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0004672 - protein kinase activity [Evidence IDA]; GO:0004713 - protein-tyrosine kinase activity [Evidence IDA]; GO:0016740 - transferase activity [Evidence IEA]; GO:0015631 - tubulin binding [Evidence IDA] GO_process : GO:0030900 - forebrain development [Evidence IGI] [Evidence IMP]; GO:0007242 - intracellular signaling cascade [Evidence IEA]; GO:0042552 - myelination [Evidence TAS]; GO:0001764 - neuron migration [Evidence IMP] [Evidence IGI]; GO:0018108 - peptidyl-tyrosine phosphorylation [Evidence IDA]; GO:0006468 - protein amino acid phosphorylation [Evidence IEA]; GO:0008360 - regulation of cell shape [Evidence IDA] codon_start : 1 exception : mismatches in translation function : protein tyrosine kinase note : Src Kinase p59 product : protein-tyrosine kinase fyn protein_id : NP_032080.1

name	Traf3ip2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31542077 CCDS:CCDS23789.1 GeneID:103213 MGI:2143599
definition	GO_function : GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0001783 - B cell apoptosis [Evidence IMP]; GO:0006959 - humoral immune response [Evidence IMP]; GO:0048305 - immunoglobulin secretion [Evidence IMP] codon_start : 1 product : Traf3 interacting protein 2 protein_id : NP_598761.2

name	EG667970 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94388035 GeneID:667970 MGI:3643313
definition	codon_start : 1 product : hypothetical protein protein_id : XP_998710.1

name	E130307A14Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149260695 GeneID:327744 MGI:3036287
definition	codon_start : 1 product : hypothetical protein LOC327744 protein_id : XP_001475712.1

name	Rev3l (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:33859616 CCDS:CCDS23790.1 GeneID:19714 MGI:1337131
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0008408 - 3'-5' exonuclease activity [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0016779 - nucleotidyltransferase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0006281 - DNA repair [Evidence IMP]; GO:0006260 - DNA replication [Evidence IEA]; GO:0006974 - response to DNA damage stimulus [Evidence IEA] codon_start : 1 exception : mismatches in translation product : REV3-like, catalytic subunit of DNA polymerase zeta RAD54 like protein_id : NP_035394.1

name	4930547M16Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149260730 GeneID:75299 MGI:1922549
definition	codon_start : 1 product : hypothetical protein LOC75299 isoform 2 protein_id : XP_001476857.1

name	4930547M16Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149260728 GeneID:75299 MGI:1922549
definition	codon_start : 1 product : hypothetical protein LOC75299 isoform 1 protein_id : XP_001476839.1

name	2010001E11Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94388039 GeneID:72045 MGI:1919295
definition	codon_start : 1 product : hypothetical protein LOC72045 protein_id : XP_125582.3

name	BC021785 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:47894381 CCDS:CCDS23791.1 GeneID:215928 MGI:2446139
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005351 - sugar porter activity [Evidence IEA]; GO:0005215 - transporter activity [Evidence IEA] GO_process : GO:0006810 - transport [Evidence IEA] codon_start : 1 product : hypothetical protein LOC215928 protein_id : NP_001001489.1

name	AI317395 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21450199 GeneID:215929 MGI:2143575
definition	codon_start : 1 product : hypothetical protein LOC215929 protein_id : NP_659070.1

name	EG666342 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94387946 GeneID:666342 MGI:3643695
definition	codon_start : 1 product : similar to Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) protein_id : XP_991943.1

name	Slc16a10 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30794382 GeneID:72472 MGI:1919722
definition	GO_component : GO:0016020 - membrane [Evidence IEA] codon_start : 1 product : solute carrier family 16 (monocarboxylic acid transporters), member 10 protein_id : NP_082523.1

name	LOC100040915 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040915
definition	number : 1 pseudo : _no_value

name	LOC100040915 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040915
definition	number : 2 pseudo : _no_value

name	LOC629337 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:629337
definition	number : 2 pseudo : _no_value

name	LOC629337 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:629337
definition	number : 1 pseudo : _no_value

name	LOC667982 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667982
definition	number : 1 pseudo : _no_value

name	LOC667994 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667994
definition	number : 1 pseudo : _no_value

name	LOC667994 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667994
definition	number : 2 pseudo : _no_value

name	LOC667994 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667994
definition	number : 3 pseudo : _no_value

name	LOC667994 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667994
definition	number : 4 pseudo : _no_value

name	LOC667994 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667994
definition	number : 5 pseudo : _no_value

name	LOC667994 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667994
definition	number : 6 pseudo : _no_value

name	LOC667994 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667994
definition	number : 7 pseudo : _no_value

name	LOC667994 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667994
definition	number : 8 pseudo : _no_value

name	LOC667994 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667994
definition	number : 9 pseudo : _no_value

name	EG624165 (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:149260688 GeneID:624165 MGI:3647945
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 mRNAs, 1440 ESTs, 1 Protein product : predicted gene, EG624165 pseudo : _no_value transcript_id : XR_032300.1

name	LOC667964 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149260693 GeneID:667964
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 ESTs, 2 Proteins product : similar to C130022K22Rik protein pseudo : _no_value transcript_id : XR_032344.1

name	EG666304 (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:94387944 GeneID:666304 MGI:3644140
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 16 ESTs product : predicted gene, EG666304 pseudo : _no_value transcript_id : XR_001938.1

name	LOC213332 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149260696 GeneID:213332
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 65 ESTs, 7 Proteins product : similar to Na+ dependent glucose transporter 1 pseudo : _no_value transcript_id : XR_032385.1

name	LOC100041085 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149260697 GeneID:100041085
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 7 Proteins product : similar to Na+ dependent glucose transporter 1 pseudo : _no_value transcript_id : XR_032415.1

clone name	MSMg01-430P04
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-495H01
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-453A13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-488A06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-149M15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-155N04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-132L08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-263C18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-360B07
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-214B12
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-119F18
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-152M14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-269E08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-048D24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-364B05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-196J14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-540H22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-123D16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-431I19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-326N24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-151F06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-435B03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-415K04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-496M07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-530B17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-474I05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-089C18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-386D15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-302A01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-439L08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-431F12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-272M10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-211L07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-506D16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-331I12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-136B23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-411O04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-176P15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-048K07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-417J11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-158J18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-512N05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-181I04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-185C12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-521O01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-380I10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-273P20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-182O23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-482D09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-480G15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-081A06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-127O20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-470B24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-452F03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-120C02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-493G02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-335H07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-473N15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-339O08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-474G23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-085A06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-442B10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-502I17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-335K24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-274H03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-374E09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-523D01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-309G24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-425M17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-154G15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-531D15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-152B21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-396P20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-473N15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-364M24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-531H05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-105M12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-344E12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-397A22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-153O12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-265H16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-449D22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-349E13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-345A22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-330L06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-455O09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-344D08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-487A14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-233F10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-375B13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-052G02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-441M08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-065O10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-465L05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-073B03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-388L02
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-337K16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-146G02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-521C04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-532E08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-304G01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-191I22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-343C10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-373P07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-376M11
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-261D16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-189G15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-369M01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-548J07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-260F09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-030E04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-293N19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-140F06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-289F24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-097I01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-139B04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-307B15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-240E10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-113B08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-054I22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-032O08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-314J23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-317A12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-262F17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-105C12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-177G20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-295F08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-113I23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-129I04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-050P07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-174M05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-072D11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-156J07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-074L07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-218E01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-126L16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-328P07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-049E22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-094K08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-043H16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-262N18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-047K02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-276C04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-128P18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-066P02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-099N01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-096L10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-215G21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-076F13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-294C02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-042M19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-033A11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-282L03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-106D24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-043C08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-302A09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-123L17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-335D06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-264M16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-252O01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-256J03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-014L04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-118N17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-299B23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-188C16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-112I07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-040J12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-133B08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-169F08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-312D23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-087C10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-038A08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-185N21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-338E07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-219K14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-003M07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-024G18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-329A04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-240O14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-225F09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-161I21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-086B14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-150K07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-343B06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-208C13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-054G24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-318L02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-342L23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-277J12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-147J02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-291E03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-303J07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-023O22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-208P12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-001H10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-276M04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-075I12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-065D10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-258O09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-244K20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-132O24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-332I09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-126M21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-321M22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-097C11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-070O16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-344J04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-197E13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-261P16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-279M22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-130D14
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	MSMg01-182O23.T7 (MSMg01no182_o23.b1)	MSMg01-182O23.TJ (MSMg01no182_o23.g1)
ACC	AG375677	AG375678
length	731	821
length of high quality (start - end)	679 (48 - 726)	187 (77 - 263)
definition	CHROMAT_FILE: MSMg01no182_o23.b1 PHD_FILE: MSMg01no182_o23.b1.phd.1 CHEM: term DYE: big TIME: Tue May 17 19:56:49 2005	CHROMAT_FILE: MSMg01no182_o23.g1 PHD_FILE: MSMg01no182_o23.g1.phd.1 CHEM: term DYE: big TIME: Tue May 17 19:56:49 2005
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	ATCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGC GGAATTCTCACCTGATGACTACCAAATGGCTGAAAAGCACCTGAAAAAAT GTTCAGCATCCTTAATCATCAGGGAAATGCAAATCAAAACAACCCTGAGA TTCCACCTCACATCAGTCAGAATGGCTAAGATCAAAAATTCAAGTGACAG CAGATGCTGGCGAGGATGTGGAGAAAAAGGAACACTCCTCCATTGTTGGT GGGATTGAAAAGTTGTACAACCACTCTGGAAATCAGTCTGGCAGTTCCTC AGAAAATTGGACATAGTACTACCAGAGGATCCTGCAATAGCTCTCCTGGG CATATATCCAGATGATGTTCCAACTGGTAATAAGGACACATGCTCCACTA TGTTCACAGCAGCCTTATTTATAATAGCCAGAAGTTGGAAAGAACCCAGA TGCCCTTCAACAGAGGAATGGATACAGAAAATGTGGTACATTTACACAAT GGAATACTACTCAGCTATTAAAAAGAATGAATTCATGAAATTCCTAGGCA AATGGATGGACCTGGAGGGCATCATCCTGAGTGAGGTAACCCAATCACAA AGGAACTCACACAATATGTACTCACTGATGAGTGGATATTAGCCCAGAAT CTTAGAATACCCAAGATACAAGATACAATTTGCAAAACACATGACACTGA AGAAGAACGAAGACCAAAGTGTGGACACTTT	CCGATGCTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXCTAAGCTGGTTGATTTACAAAGAA AGGTTTATTAAGCTTACAGTCCTGGAGGGAAAGGATGATGTTAGCATCTG TACTGCAGACATGGAAGGTTCTGTGGATGTGCGTGCGTGTGTGCGTGTGA GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA GAGAGAGAGAGAGATACTTCCCCCCCCCCTTTTTTTTTTTTTNNTTCCTC TCTTCTCTTTCCCTTTTTTTTCTTTTTTTTTCCTTCTCCCCTCTTCGCTT TTTCCCATCCTTTTTCCTCCCCCCCCCCCCCCCCCCCACCCATACCCACC CCCTTATCTCCTCTTTCCCTCTGTCTTTTTTCCCCCCCCCCCTTTATTTC CTTTATATATGTCACTTCCTCATTCTTATCTTCCTCCCCTCTCCACCTAA TTTTCCTTCCCCTCTTTTATTTTTCTTTCTCTCCCTCTCCTTTCTTTCTC CTTCTTACTTTTTCAATTTACGCCTACCCCTATATCAGTCTTCTTTATTT TCCTTTCTAACACCCTCCTCCTCCATCTCCTATTCTCCCCCCAGTCTTCT TTTTCCTCTCTATTTCTTTTCATTCTCTCCTTTTATCTTACAATATCTTC ATCTATCTCCTATCTTTCTTCCCACCCTCTCTTCTAACCTTGTTTCTTTC TCCTTCCCACTCTTCCCTATTCCTATTATTTATTTTTTCTTCCTTATTCT TCCTCTTATTTTCCTCTCCCA
quality values	Open. Hide. 6 6 10 8 7 6 6 6 16 22 37 41 37 37 37 32 32 37 37 37 37 37 41 37 37 44 48 30 28 28 28 25 22 27 19 18 16 17 17 13 13 19 12 14 14 26 28 31 59 48 57 36 36 35 35 37 42 42 47 47 47 42 34 23 10 8 8 8 8 8 10 20 26 42 51 47 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 51 50 50 50 51 51 51 51 51 51 68 68 68 68 68 68 68 68 68 68 68 68 68 68 51 50 57 42 42 42 50 50 50 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 48 48 46 50 50 51 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 59 57 57 57 57 68 68 68 68 68 68 57 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 59 59 59 59 62 68 62 62 62 62 62 62 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 62 62 68 62 62 62 62 52 62 62 62 62 62 62 62 62 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 62 62 62 62 62 62 62 62 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 59 57 57 57 59 59 59 57 43 41 23 18 18 15 18 21 36 44 57 57 68 68 68 68 68 68 68 68 59 59 59 57 57 57 57 57 57 59 59 59 59 57 54 54 57 57 57 52 48 48 57 57 57 57 59 59 68 59 59 57 57 57 57 57 57 57 57 59 57 57 68 57 57 57 57 57 57 57 59 59 68 68 68 68 57 57 54 54 48 57 59 57 57 57 57 59 68 68 68 68 68 68 68 57 57 48 46 57 48 43 43 57 59 54 54 47 48 48 48 53 50 57 57 57 59 59 59 59 59 59 59 59 59 59 59 48 47 46 47 47 47 41 41 32 32 39 39 39 41 42 50 42 48 48 50 53 53 53 57 59 59 59 59 59 57 59 59 57 57 48 48 57 59 59 59 59 50 50 50 47 47 47 48 47 37 37 37 37 37 41 41 41 39 37 37 44 44 41 47 47 37 36 36 36 37 43 59 59 59 59 59 43 43 43 43 37 39 37 37 37 41 39 38 29 29 32 37 37 34 30 30 30 29 29 37 39 41 39 47 37 37 25 24 13 13 13 26 26 32 31 31 39 39 37 39 35 27 27 24 16 18 30 34 39 39 35 28 26 31 30 30 22 22 22 25 30 37 41 40 47 37 23 23 9 9 9 27 23 34 25 20 23 24 24 28 25 27 32 32 27 25 32 30 27 25 32 37 37 39 34 33 31 22 22 24 28 28 21 23 12 12	Open. Hide. 6 6 6 6 10 12 10 10 10 15 15 32 32 37 41 41 37 50 39 44 50 50 50 50 50 50 50 42 34 35 23 20 12 12 11 11 11 11 13 13 27 24 33 33 37 37 37 39 53 50 50 50 50 37 42 53 47 35 32 19 19 12 9 9 9 10 24 27 57 57 41 41 42 47 50 50 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 50 50 51 51 51 51 68 68 68 68 68 68 57 68 68 68 59 57 57 59 59 57 57 57 57 57 57 57 57 59 59 59 48 57 57 57 57 59 59 59 59 50 50 50 50 50 50 50 51 51 68 57 57 57 57 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 50 50 51 68 68 68 68 68 57 57 57 57 57 57 57 57 57 57 57 57 59 59 59 68 68 68 68 68 68 68 68 68 68 68 68 59 57 57 57 48 48 48 57 57 57 57 57 57 59 59 59 59 59 57 57 57 57 59 59 59 59 59 59 59 59 59 59 57 57 57 57 57 59 59 59 59 59 59 59 59 57 57 59 59 59 59 59 54 54 54 48 48 48 48 46 46 39 47 28 34 21 12 11 11 11 11 10 10 8 8 15 12 22 24 19 14 13 12 10 10 10 10 8 8 15 8 9 11 10 13 3 0 0 3 6 8 8 8 8 8 8 8 10 8 9 9 9 9 10 10 10 11 10 10 10 18 13 10 10 7 7 8 19 9 9 10 21 19 11 11 12 13 13 13 15 14 14 14 15 10 10 9 8 6 6 6 6 10 8 9 10 9 9 8 10 8 8 8 8 12 19 15 8 6 6 8 8 8 8 8 12 12 15 19 17 19 13 12 12 12 15 15 9 9 9 8 8 8 11 8 9 8 8 10 13 13 13 14 18 15 10 10 10 8 8 9 9 9 9 8 8 10 8 8 8 8 10 10 11 9 9 9 10 8 8 10 8 8 10 12 18 19 30 22 19 19 19 22 16 10 10 10 10 9 9 9 10 8 12 8 8 10 8 8 8 8 10 8 8 8 8 8 8 8 9 9 9 9 9 10 8 8 6 6 6 8 10 10 10 10 12 10 9 10 10 8 8 8 8 8 10 10 7 9 11 10 9 9 11 11 10 10 8 8 8 8 8 8 14 12 11 11 10 16 13 12 10 10 8 10 8 13 11 11 10 10 10 10 11 17 12 9 9 9 10 12 14 19 14 14 11 12 15 12 10 9 8 8 8 8 10 8 8 8 9 10 11 11 11 11 8 8 6 6 8 8 10 8 8 8 8 6 8 8 8 10 8 8 6 6 8 8 8 8 8 8 8 8 8 10 12 14 15 17 21 15 12 10 10 10 11 15 9 11 11 11 12 14 9 9 9 8 8 6 6 8 10 10 12 8 8 8 8 8 8 8 8 8 8 9 9 9 13 13 10 10 10 13 14 12 8 8 6 6 7 7 12 12 21 12 13 19 15 15 10 10 6 6 8 8 10 8 8 8 8 7 6 10 8 9 9 12 12 10 10 6 6 8 8 12 12 13 8 8 8 6 8 6 6 8 8 10 12 14 10 10 9 9 9 10 10 10 9 9 9 9 9 9 9 9 9 10 11 11 10 9 10 10 7 9 11 7 6 6 8 8 9 7 8 8 12 12 13 10 8 6 6 8 8 8 8 10 10 11 10 10 10 9 9 9 13 16 13 10 10 10 8 8 8 8 8 8 10 10 10 9 10 10 11 11 11 11 11 12 10 10 10 9 13 9 9 10 10 10 16 10 10 8 8 12 13 9 9 8 7 8 12 8 8 8 10 10 9 8 11 8 9 9 19 18 19 19 12 13 10 11 8 8 6 6

Alignment Information

BAC End 1

BAC End 2

Query= MSMg01no182_o23.g1 MSMg01no182_o23.g1 CHROMAT_FILE:
MSMg01no182_o23.g1 PHD_FILE: MSMg01no182_o23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:56:49 2005
         (187 letters)



>mm_chr10_38818370_38818956
          Length = 587

 Score =  234 bits (121), Expect = 2e-66
 Identities = 170/193 (88%), Gaps = 13/193 (6%)
 Strand = Plus / Minus

                                                                       
Query: 1   ctaagctggttgatttacaaagaaaggtttattaagcttacagtcctggagggaaaggat 60
           ||||||||||||||||||||||||||| |||||||  |||||||||||||||||||||||
Sbjct: 321 ctaagctggttgatttacaaagaaaggcttattaaatttacagtcctggagggaaaggat 262

                                                                       
Query: 61  gatgttagcatctgtactgcagacatggaaggttctgtggatgtgcgtgcgtg--tg--- 115
           |||||||||||||||||||||||||||||||||||||||||||||||||||||  ||   
Sbjct: 261 gatgttagcatctgtactgcagacatggaaggttctgtggatgtgcgtgcgtgcgtgcgt 202

                                                                       
Query: 116 -------tgcgtgtgagagagagagagagagagagagagagagagagagagagagagaga 168
                  |||||||| | | | | | |||||||||||||||||||||| |||||||||||
Sbjct: 201 gcgttcatgcgtgtgtgtgtgtgtgtgagagagagagagagagagagacagagagagaga 142

                        
Query: 169 gagagagagagag 181
           |||||||| ||||
Sbjct: 141 gagagaga-agag 130


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 6
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 187
Length of database: 587
Length adjustment: 8
Effective length of query: 179
Effective length of database: 579
Effective search space:   103641
Effective search space used:   103641
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information