Query= MSMg01no183_k18.b1 MSMg01no183_k18.b1 CHROMAT_FILE:
MSMg01no183_k18.b1 PHD_FILE: MSMg01no183_k18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:57:45 2005
(685 letters)
>mm_chr10_100124062_100125146
Length = 1085
Score = 1237 bits (640), Expect = 0.0
Identities = 662/682 (97%), Gaps = 20/682 (2%)
Strand = Plus / Plus
Query: 4 ggaattctcttctgattacttccattttcacagtgaagtaaaaagaaagtcactggtgca 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattctcttctgattacttccattttcacagtgaagtaaaaagaaagtcactggtgca 263
Query: 64 tacttacacagaaggtgcatagtttatgctaccatttgagtcaaagctttcccacttctc 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 tacttacacagaaggtgcatagtttatgctaccatttgagtcaaagctttcccacttctc 323
Query: 124 ccctttgaaggtcagaattctcagcattagaagttgtggggaagatgcatttgagtcatt 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 ccctttgaaggtcagaattctcagcattagaagttgtggggaagatgcatttgagtcatt 383
Query: 184 tgggcccaaatgagagatgacaaatgactgaacacctggagcagtcccatagttaaaaca 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 tgggcccaaatgagagatgacaaatgactgaacacctggagcagtcccatagttaaaaca 443
Query: 244 tttacattcttattattgaaataattgggcatccttcatcaaaatcaaagcacacacttc 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 tttacattcttattattgaaataattgggcatccttcatcaaaatcaaagcacacacttc 503
Query: 304 tctttaaaaaaagaaagaaagaaaggaagaaagaaagaaagaaagaaagaaagaaagaaa 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 tctttaaaaaaagaaagaaagaaaggaagaaagaaagaaagaaagaaagaaagaaagaaa 563
Query: 364 gaaagaaagaaagaaagaaagaatatttgcctaggttgcctagtaaaatgaggtttgtag 423
||| |||||||||||||||||||||||||||||||||||||
Sbjct: 564 gaa--------------------tatttgcctaggttgcctagtaaaatgaggtttgtag 603
Query: 424 tcacccaggacagcagtaggatggaattgaatagcactctctctttacacaagtccctgc 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 604 tcacccaggacagcagtaggatggaattgaatagcactctctctttacacaagtccctgc 663
Query: 484 aatgttttccagtctctaggacactcattgttatcttgttactggcatggctagctctcc 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 664 aatgttttccagtctctaggacactcattgttatcttgttactggcatggctagctctcc 723
Query: 544 ggtattagttttccaacatcagaaattgagtcaaaggctttgtttgctgctattcaggag 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 724 ggtattagttttccaacatcagaaattgagtcaaaggctttgtttgctgctattcaggag 783
Query: 604 ctgtttgtggtgtaactcttctgaatggtggctcctggcaccagttcagtgtaggggtct 663
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 784 ctgtttgtggtgtaactcttctgaatggtggctcctggcaccagttcagtgtaggggtct 843
Query: 664 gaagctcaatagatctttgcag 685
||||||||||||||||||||||
Sbjct: 844 gaagctcaatagatctttgcag 865
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 52
Number of extensions: 10
Number of successful extensions: 10
Number of sequences better than 10.0: 1
Number of HSP's gapped: 5
Number of HSP's successfully gapped: 1
Length of query: 685
Length of database: 1085
Length adjustment: 10
Effective length of query: 675
Effective length of database: 1075
Effective search space: 725625
Effective search space used: 725625
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no183_k18.g1 MSMg01no183_k18.g1 CHROMAT_FILE:
MSMg01no183_k18.g1 PHD_FILE: MSMg01no183_k18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:57:45 2005
(292 letters)
>mm_chr10_100217664_100218355
Length = 692
Score = 565 bits (292), Expect = e-165
Identities = 292/292 (100%)
Strand = Plus / Minus
Query: 1 agctgaagcagacatttcgtaaatagatacagagtataaacggtcatgtataaagttgct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 492 agctgaagcagacatttcgtaaatagatacagagtataaacggtcatgtataaagttgct 433
Query: 61 caccatacacaaaaaggaagagctggtttcttaggggtcaaaggggccgcacaagcaatc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 caccatacacaaaaaggaagagctggtttcttaggggtcaaaggggccgcacaagcaatc 373
Query: 121 tcggttcttaagccgtagaaccaaaaacaattcgcgtctccacttctgaactgaaatggg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 tcggttcttaagccgtagaaccaaaaacaattcgcgtctccacttctgaactgaaatggg 313
Query: 181 atgttaagtacctatcaccatgtataaaagaactcatctggtttcccacaaggagaacgc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 atgttaagtacctatcaccatgtataaaagaactcatctggtttcccacaaggagaacgc 253
Query: 241 tgaacgggcaacaattagttgattaattattcatcagcattgccaatgctct 292
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 tgaacgggcaacaattagttgattaattattcatcagcattgccaatgctct 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 292
Length of database: 692
Length adjustment: 9
Effective length of query: 283
Effective length of database: 683
Effective search space: 193289
Effective search space used: 193289
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
