Query= MSMg01no184_a16.b1 MSMg01no184_a16.b1 CHROMAT_FILE:
MSMg01no184_a16.b1 PHD_FILE: MSMg01no184_a16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:58:14 2005
(305 letters)
>mm_chr10_17145355_17146059
Length = 705
Score = 507 bits (262), Expect = e-148
Identities = 295/312 (94%), Gaps = 11/312 (3%)
Strand = Plus / Plus
Query: 4 ggaattcattatgtagaccaggctggcttcgaactcagagatctgcctgtctctgcctcc 63
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 195 ggaattcattatgtagaccaggctggattcgaactcagagatctgcctgtctctgcctcc 254
Query: 64 tgagtgctgggattaaagtatggtcaccatgccaggccaaaatgtatttttcttatatta 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 255 tgagtgctgggattaaagtatggtcaccatgccaggccaaaatgtatttttcttatatta 314
Query: 124 acataattttttttagttcccaaagaaggccctaaaataataaaaataaaataaaataaa 183
||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 acataattttttt-agttaccaaagaaggccctaaaataataaaaataaaataaaataaa 373
Query: 184 ataa----------taaaatacaaaatgtaattcaaccctggtctcgtgtctattgacca 233
|||| ||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 374 ataaaataaaataataaaatacaaaatgtaactcaaccctggtctcgtgtctattgaccg 433
Query: 234 tatttattttcacccagtttctatgatctttggtaagtcagaggttaacccattgttccc 293
||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
Sbjct: 434 tatttattttcacccagtttctatgatctttgggaagtcagaggttaacccattgttctc 493
Query: 294 agtctcttattt 305
||||||||||||
Sbjct: 494 agtctcttattt 505
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 305
Length of database: 705
Length adjustment: 9
Effective length of query: 296
Effective length of database: 696
Effective search space: 206016
Effective search space used: 206016
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no184_a16.g1 MSMg01no184_a16.g1 CHROMAT_FILE:
MSMg01no184_a16.g1 PHD_FILE: MSMg01no184_a16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:58:14 2005
(230 letters)
>mm_chr10_17257817_17258446
Length = 630
Score = 426 bits (220), Expect = e-124
Identities = 226/228 (99%)
Strand = Plus / Minus
Query: 1 cattgctaagtagcttagaaccacatctctcagggttcaaagattctcagggatggtggt 60
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 317 cattgctaagtagcttagaaccacatctctcggggttcaaagattctcagggatggtggt 258
Query: 61 ttccagaagaattcttcatatttttgttttctatttcagtaataaatcttaatggtcatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 257 ttccagaagaattcttcatatttttgttttctatttcagtaataaatcttaatggtcatt 198
Query: 121 ttatcaattttaaattatttattaattatatagttattgttagtaattatacattacatg 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 197 ttatcaattttaaattatttattaattatatagttattgttagtaattatacattatatg 138
Query: 181 ttatatgtgatttatatataagtaaatttattataaaagtgttttatg 228
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 137 ttatatgtgatttatatataagtaaatttattataaaagtgttttatg 90
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 230
Length of database: 630
Length adjustment: 9
Effective length of query: 221
Effective length of database: 621
Effective search space: 137241
Effective search space used: 137241
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
