Query= MSMg01no185_c14.b1 MSMg01no185_c14.b1 CHROMAT_FILE:
MSMg01no185_c14.b1 PHD_FILE: MSMg01no185_c14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:59:47 2005
(307 letters)
>mm_chr10_124621079_124621785
Length = 707
Score = 511 bits (264), Expect = e-149
Identities = 294/304 (96%)
Strand = Plus / Minus
Query: 4 ggaattccttcccttaaggttgccaagaacactttaaggacaccctcttctctaagctgg 63
||||||| |||||||||||||||||| |||||||||||||| ||||||||||||||||||
Sbjct: 507 ggaattctttcccttaaggttgccaataacactttaaggacgccctcttctctaagctgg 448
Query: 64 gtgttgttctcagacatttttattggagcaggaagttgggtgtacccttctgggaaagaa 123
||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 447 gtgttgttctccgacttttttattggagcaggaagttgggtgtacccttctgggaaagga 388
Query: 124 agagtccaaaacagggcctgcagtctacataccagcagggtgctatggtgcctggcagtc 183
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 agagtccaaaacatggcctgcagtctacataccagcagggtgctatggtgcctggcagtc 328
Query: 184 ttaggtcagagtaactgctgactcccaggcttctccagaatgtttgatgcctggaaggca 243
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 327 ttaggtcagagtaactgctgactcccgggcttctccagaatgtttgatgcctggaaggca 268
Query: 244 ttgttaaaaggattgcactcctcccctctgtggctggagcttagcagcataccctgaagt 303
||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 267 ttgttaaaaggattgcattcctcccctctgtggctcgagcttagcagcataccctgaagt 208
Query: 304 caga 307
||||
Sbjct: 207 caga 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 307
Length of database: 707
Length adjustment: 9
Effective length of query: 298
Effective length of database: 698
Effective search space: 208004
Effective search space used: 208004
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no185_c14.g1 MSMg01no185_c14.g1 CHROMAT_FILE:
MSMg01no185_c14.g1 PHD_FILE: MSMg01no185_c14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:59:48 2005
(313 letters)
>mm_chr10_124475785_124476496
Length = 712
Score = 590 bits (305), Expect = e-173
Identities = 311/313 (99%), Gaps = 1/313 (0%)
Strand = Plus / Plus
Query: 1 cattcagtgttggcagcaagcttgttggacaggtatacatattttcctataaatggcaca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cattcagtgttggcagcaagcttgttggacaggtatacatattttcctataaatggcaca 260
Query: 61 tgggttagtactaagccttttatagtacagtgtcagcaaatgtcaaatcaaaaaaatgca 120
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgggttaatactaagccttttatagtacagtgtcagcaaatgtcaaatcaaaaaaatgca 320
Query: 121 aactgcattcattaacccagcacattaaaatttacttcaatgccatgcacttagtaagta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aactgcattcattaacccagcacattaaaatttacttcaatgccatgcacttagtaagta 380
Query: 181 tttaaatatgtgttaaacaaaattgtctttgaaagtaattttctgttattggattaattt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tttaaatatgtgttaaacaaaattgtctttgaaagtaattttctgttattggattaattt 440
Query: 241 tatggtttatgccatatgatacattttcctttaaaaaattatttgaggaagcatttttcc 300
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 441 tatggtttatgccatatgatacattttcctttaaaaa-ttatttgaggaagcatttttcc 499
Query: 301 attaaatagggca 313
|||||||||||||
Sbjct: 500 attaaatagggca 512
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 313
Length of database: 712
Length adjustment: 9
Effective length of query: 304
Effective length of database: 703
Effective search space: 213712
Effective search space used: 213712
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
