Query= MSMg01no185_d06.b1 MSMg01no185_d06.b1 CHROMAT_FILE:
MSMg01no185_d06.b1 PHD_FILE: MSMg01no185_d06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:59:50 2005
(316 letters)
>mm_chr10_66266891_66267606
Length = 716
Score = 580 bits (300), Expect = e-170
Identities = 309/312 (99%)
Strand = Plus / Plus
Query: 5 gaattcaatctccagatgtgactcagacaagtccttgtatctcttcatgacttttgcaac 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcaatctccagatgtgactcagacaagtccttgtatctcttcatgacttttgcaac 264
Query: 65 cagtggatagaattatacattgtatacattgtatacaatcctgtgctggggaagaacctg 124
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 cagtggatagacttatacattgtatacattgtatacaatcctgtgctggggaagaacctg 324
Query: 125 gtaaagtcattcagtttacccatccttctggctttgagaaaaactaaagagaaattacct 184
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 325 gtaaagtcattcagtttacccattcttctggctttgagaaaaactaaagagaaattacct 384
Query: 185 cagacatacagatttataccactaaaagcaactttaaaaaatgtccaatgtaagtttcct 244
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 385 cagacatacagatttataccactaaaagcaactttaaaaattgtccaatgtaagtttcct 444
Query: 245 agatgtgaaaacctcctttcttcaatcagccactgaacactgtagaggaattttaatcca 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 agatgtgaaaacctcctttcttcaatcagccactgaacactgtagaggaattttaatcca 504
Query: 305 gctattctgatc 316
||||||||||||
Sbjct: 505 gctattctgatc 516
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 316
Length of database: 716
Length adjustment: 9
Effective length of query: 307
Effective length of database: 707
Effective search space: 217049
Effective search space used: 217049
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no185_d06.g1 MSMg01no185_d06.g1 CHROMAT_FILE:
MSMg01no185_d06.g1 PHD_FILE: MSMg01no185_d06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:59:50 2005
(297 letters)
>mm_chr10_66420610_66421307
Length = 698
Score = 534 bits (276), Expect = e-156
Identities = 289/296 (97%), Gaps = 6/296 (2%)
Strand = Plus / Minus
Query: 1 catgccagcacccatacagcagaaaactgactctgccatgttgttctatggcctccgttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 347 catgccagcacccatacagcagaaaactgactctgccatgttgttctatggcctccgttt 288
Query: 61 acagccatggtacgtttctcccctgactcccacacatatttttaaaaagtttaatacata 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 287 acagccatggtacgtttctcccctgactcccacacatatttttaaaaagtttaatacata 228
Query: 121 aactt-aaaaaaaagataataatctgtcccaaatccctgtgcttgctaggcacgctctat 179
||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 227 aacttaaaaaaaaagataataatctgtcccaagtccctgtgcttgctaggcacgctctat 168
Query: 180 gccactgagccacattctcaggtcaactgtacattttgtcttttttcttttcttttcatg 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 167 gccactgagccacattctcaggtcaactgtacattttgtcttttttcttttcttttcatg 108
Query: 240 aatttaattatttatttttttttttaggtttttcgagacagggtttctctgtgtag 295
|||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 107 aatttaatta-----ttttttttttaggtttttcgagacagggtttctctgtgtag 57
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 297
Length of database: 698
Length adjustment: 9
Effective length of query: 288
Effective length of database: 689
Effective search space: 198432
Effective search space used: 198432
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
