Query= MSMg01no185_e15.b1 MSMg01no185_e15.b1 CHROMAT_FILE:
MSMg01no185_e15.b1 PHD_FILE: MSMg01no185_e15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:59:56 2005
(665 letters)
>mm_chr10_51255351_51256415
Length = 1065
Score = 1232 bits (637), Expect = 0.0
Identities = 655/661 (99%)
Strand = Plus / Plus
Query: 5 gaattctttgttcagctctgtaccccattttttaaatgaggttatttgattttctggagt 64
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctttgtttagctctgtaccccattttttaaatgaggttatttgattttctggagt 264
Query: 65 ccagcttcttgagttctttgtatatattggatattagtcccctctcagatttaggatagg 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ccagcttcttgagttctttgtatatattggatattagtcccctctcagatttaggatagg 324
Query: 125 taaagatcctttcccagtctgttggtggcctttttgtcgtattgacagtgtcttttgcct 184
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 taaagatcctttcccaatctgttggtggcctttttgtcgtattgacagtgtcttttgcct 384
Query: 185 tacagaagctttgcaattttatgaggtcccgtctgtcaattctctatcttacaacaaaag 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tacagaagctttgcaattttatgaggtcccgtctgtcaattctctatcttacaacaaaag 444
Query: 245 ccattgctgttttgttcaagaatttttcccctgtgtccatatctttgaggcttttcccca 304
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 445 ccattgctgttttgttcaagaatttttcccctgtgcccatatctttgaggcttttcccca 504
Query: 305 ctttctcctctataagtttcagagtctctggttttatgtggagttccttgatccacttag 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 ctttctcctctataagtttcagagtctctggttttatgtggagttccttgatccacttag 564
Query: 365 cacacaaatttcagtttctttagttatctgacagaattttaaatcacttctaattatacc 424
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 tagacaaatttcagtttctttagttatctgacagaattttaaatcacttctaattatacc 624
Query: 425 atggcattatttcctattctactttataactgtcttcttttaaaaagtataattttataa 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 atggcattatttcctattctactttataactgtcttcttttaaaaagtataattttataa 684
Query: 485 tataaatctgattatttataacgattttgctatgtatagtttcacatacttagctttgat 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 tataaatctgattatttataacgattttgctatgtatagtttcacatacttagctttgat 744
Query: 545 aagctccattcttcacaactctataaactttatttaatgaaacaattacaatggctacta 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 aagctccattcttcacaactctataaactttatttaatgaaacaattacaatggctacta 804
Query: 605 ctacccaattttcctgataagtaatgaaacacagggtttacagggggttacattaattct 664
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 805 ctacccaattttcttgataagtaatgaaacacagggtttacagggggttacattaattct 864
Query: 665 c 665
|
Sbjct: 865 c 865
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 665
Length of database: 1065
Length adjustment: 10
Effective length of query: 655
Effective length of database: 1055
Effective search space: 691025
Effective search space used: 691025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no185_e15.g1 MSMg01no185_e15.g1 CHROMAT_FILE:
MSMg01no185_e15.g1 PHD_FILE: MSMg01no185_e15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:59:56 2005
(282 letters)
>mm_chr10_51411556_51412237
Length = 682
Score = 526 bits (272), Expect = e-154
Identities = 279/282 (98%), Gaps = 2/282 (0%)
Strand = Plus / Minus
Query: 1 actcaggctattgattgcctgatgacagagagatcagagccttcaaacacaaggactgtg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 637 actcaggctattgattgcctgatgacagagagatcagagccttcaaacacaaggactgtg 578
Query: 61 gcagcaaagctgtttctcttgactcaatgtcacttgagttagacagtggttttaaaacta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 577 gcagcaaagctgtttctcttgactcaatgtcacttgagttagacagtggttttaaaacta 518
Query: 121 acacacacacgcacacacacacacacacacacacacaaataatgttatatttttaaacag 180
||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 517 acacacaca--cacacacacacacacacacacacacaaataatgttatatttttaaacag 460
Query: 181 gtatgaagaatgatgtaagtctgaaaagactgagaagatttaagctattagttttggtag 240
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 459 gtatgaagaatgatgtatgtctgaaaagactgagaagatttaagctattagttttggtag 400
Query: 241 aactaaaacagtagcctactaacctgaacagaacactgtcat 282
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 399 aactaaaacagtagcctactaacctgaacagaacactgtcat 358
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 282
Length of database: 682
Length adjustment: 9
Effective length of query: 273
Effective length of database: 673
Effective search space: 183729
Effective search space used: 183729
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
