Query= MSMg01no186_c05.b1 MSMg01no186_c05.b1 CHROMAT_FILE:
MSMg01no186_c05.b1 PHD_FILE: MSMg01no186_c05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:01:02 2005
(343 letters)
>mm_chr10_63950402_63951144
Length = 743
Score = 600 bits (310), Expect = e-176
Identities = 322/328 (98%), Gaps = 4/328 (1%)
Strand = Plus / Minus
Query: 16 gaattctctgggcttcacatggagtctgaaacccatctcctgctgacatagctaaatatt 75
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 723 gaattctctgggcttcacatggagtctgaaacccatctcctgctgacatagctaaatatt 664
Query: 76 tagactgctttgtagatactttagattagaaatatcaaataaacatgttgggagctgaaa 135
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 663 tagactgttttgtagatactttagattagaaatatcaaataaacatgttgggagctgaaa 604
Query: 136 tgccatatttaatttatctatctatctatctatctatctatctatctatctatctatcta 195
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 603 tgccatatttaatt----tatctatctatctatctatctatctatctatctatctatcta 548
Query: 196 tctaactgtgtgtatgtgtattttcccaagtgaagataaaatttgtttaaaagcaagttt 255
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 547 tctaactgtgtgtatgtgtattttcccaagtgaagaaaaaatttgtttaaaagcaagttt 488
Query: 256 aagaaaatcaagaatattaaacatattgagacatatggatttattaaaggcagaaaaagc 315
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 487 aagaaaatcaagaatattaaacatattgagacatatggatttattaaaggcagaaaaagc 428
Query: 316 ctaacccttccagatccttcttcccatt 343
||||||||||||||||||||||||||||
Sbjct: 427 ctaacccttccagatccttcttcccatt 400
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 11
Number of successful extensions: 10
Number of sequences better than 10.0: 1
Number of HSP's gapped: 7
Number of HSP's successfully gapped: 1
Length of query: 343
Length of database: 743
Length adjustment: 9
Effective length of query: 334
Effective length of database: 734
Effective search space: 245156
Effective search space used: 245156
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no186_c05.g1 MSMg01no186_c05.g1 CHROMAT_FILE:
MSMg01no186_c05.g1 PHD_FILE: MSMg01no186_c05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:01:02 2005
(367 letters)
>mm_chr10_63812298_63813064
Length = 767
Score = 648 bits (335), Expect = 0.0
Identities = 359/367 (97%)
Strand = Plus / Plus
Query: 1 agatcttattttctcccaaacttgaagataagccgtaacccaaacatttacagagtgagg 60
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 201 agatcttattttctcccaaacttgaagataagctgtaacccaaacatttacagagtgagg 260
Query: 61 agctgtcctggtgaaaatgactcaggctgatttttaccattgaggcaacgacatctactc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agctgtcctggtgaaaatgactcaggctgatttttaccattgaggcaacgacatctactc 320
Query: 121 ttgaccatgaagcacaggcatttgcattaagcaagactcttggttcatctttcaaaaagg 180
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttgaccatgaagcacaggcgtttgcattaagcaagactcttggttcatctttcaaaaagg 380
Query: 181 ctgataaaattgaaaatgacacaacactcaaattaactgcattgagattggcaatgattt 240
|||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 381 ctgagaaaattgaaaatgacacaacactcaaattaactgcattgagattgccaatgattt 440
Query: 241 tacgcatgttgctagccagttctctgtacttcaaataaataggtaactccaggacactct 300
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 taagcatgttgctagccagttctctgtacttcaaataaataggtaactccaggacactct 500
Query: 301 tctgttcctgaactaactcaacccccagaaagagagcaatgacctcgctagcatttccaa 360
||||||||||||||| |||||||||||||||||||||||||| || ||||||||||||||
Sbjct: 501 tctgttcctgaactacctcaacccccagaaagagagcaatgagcttgctagcatttccaa 560
Query: 361 gatccca 367
|||||||
Sbjct: 561 gatccca 567
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 367
Length of database: 767
Length adjustment: 9
Effective length of query: 358
Effective length of database: 758
Effective search space: 271364
Effective search space used: 271364
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
