MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	MSMg01-186O11
Chromosome	10 (Build37)
Map Location	99,914,710 - 99,914,996
singlet/doublet	singlet
Overlap gene	Tmtc3
Upstream gene	LOC100042232, LOC667502, Csl, LOC100042246, Kitl, LOC100043208, LOC100043211, EG667532, LOC670007, LOC235966, LOC667556, LOC100043224, LOC100043227, LOC100043231, LOC100043235, LOC667580, LOC100043239, LOC100043242, LOC100043244, LOC667607, LOC100043247, EG213051
Downstream gene	4930430F08Rik, 1700017N19Rik
Link	Open Mouse BAC browser

Click to get alignment info.

name	LOC100042232 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042232
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	LOC667502 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:667502
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins pseudo : _no_value

name	Csl (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:71832 MGI:1919082
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100042246 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042246
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	Kitl (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:17311 MGI:96974
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100043208 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043208
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 19 ESTs

name	LOC100043211 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043211
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs, 1 Protein

name	EG667532 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:667532 MGI:3646823
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs, 4 Proteins pseudo : _no_value

name	LOC670007 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:670007
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs, 4 Proteins

name	LOC235966 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:235966
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins pseudo : _no_value

name	LOC667556 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:667556
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs, 4 Proteins pseudo : _no_value

name	LOC100043224 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043224
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 ESTs, 5 Proteins

name	LOC100043227 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043227
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 ESTs, 5 Proteins

name	LOC100043231 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043231
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 ESTs, 5 Proteins

name	LOC100043235 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043235
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 ESTs, 5 Proteins

name	LOC667580 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:667580
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs, 4 Proteins pseudo : _no_value

name	LOC100043239 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043239
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 ESTs, 5 Proteins

name	LOC100043242 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043242
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 ESTs, 5 Proteins

name	LOC100043244 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043244
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 ESTs

name	LOC667607 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:667607
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs, 4 Proteins pseudo : _no_value

name	LOC100043247 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043247
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 ESTs, 5 Proteins

name	EG213051 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:213051 MGI:3643164
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 6 Proteins pseudo : _no_value

name	Tmtc3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:237500 MGI:3036255
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	4930430F08Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:68281 MGI:1921197
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	1700017N19Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66605 MGI:1913855
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100042232 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149261025 GeneID:100042232
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical protein LOC100042232 transcript_id : XM_001477770.1

name	Csl (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142367568 GeneID:71832 MGI:1919082
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : citrate synthase like transcript_id : NM_027945.2

name	Kitl (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:7305266 GeneID:17311 MGI:96974
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : kit ligand transcript_id : NM_013598.1

name	LOC100043208 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149261130 GeneID:100043208
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 19 ESTs product : hypothetical protein LOC100043208 transcript_id : XM_001480394.1

name	LOC100043211 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149261132 GeneID:100043211
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs, 1 Protein product : hypothetical protein LOC100043211 transcript_id : XM_001480397.1

name	LOC670007 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149261027 GeneID:670007
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs, 4 Proteins product : similar to ALY transcript_id : XM_001477845.1

name	LOC100043224 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149261136 GeneID:100043224
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 ESTs, 4 Proteins product : similar to RNA and export factor binding protein 1-II, transcript variant 1 transcript_id : XM_001480405.1

name	LOC100043224 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149261138 GeneID:100043224
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein product : similar to RNA and export factor binding protein 1-II, transcript variant 2 transcript_id : XM_001480409.1

name	LOC100043227 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149261140 GeneID:100043227
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 ESTs, 4 Proteins product : similar to RNA and export factor binding protein 1-II, transcript variant 1 transcript_id : XM_001480411.1

name	LOC100043227 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149261142 GeneID:100043227
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein product : similar to RNA and export factor binding protein 1-II, transcript variant 2 transcript_id : XM_001480412.1

name	LOC100043231 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149261144 GeneID:100043231
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 ESTs, 4 Proteins product : similar to RNA and export factor binding protein 1-II, transcript variant 1 transcript_id : XM_001480414.1

name	LOC100043231 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149261146 GeneID:100043231
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein product : similar to RNA and export factor binding protein 1-II, transcript variant 2 transcript_id : XM_001480417.1

name	LOC100043235 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149261148 GeneID:100043235
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 ESTs, 4 Proteins product : similar to RNA and export factor binding protein 1-II, transcript variant 1 transcript_id : XM_001480422.1

name	LOC100043235 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149261150 GeneID:100043235
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein product : similar to RNA and export factor binding protein 1-II, transcript variant 2 transcript_id : XM_001480425.1

name	LOC100043239 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149261153 GeneID:100043239
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 ESTs, 4 Proteins product : similar to RNA and export factor binding protein 1-II, transcript variant 1 transcript_id : XM_001480433.1

name	LOC100043239 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149261155 GeneID:100043239
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein product : similar to RNA and export factor binding protein 1-II, transcript variant 2 transcript_id : XM_001480438.1

name	LOC100043242 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149261157 GeneID:100043242
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 ESTs, 4 Proteins product : similar to RNA and export factor binding protein 1-II, transcript variant 1 transcript_id : XM_001480442.1

name	LOC100043242 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149261159 GeneID:100043242
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein product : similar to RNA and export factor binding protein 1-II, transcript variant 2 transcript_id : XM_001480446.1

name	LOC100043244 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149261161 GeneID:100043244
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 ESTs product : similar to ALY transcript_id : XM_001480452.1

name	LOC100043247 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149261164 GeneID:100043247
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 ESTs, 4 Proteins product : similar to RNA and export factor binding protein 1-II, transcript variant 1 transcript_id : XM_001480457.1

name	LOC100043247 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149261166 GeneID:100043247
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein product : similar to RNA and export factor binding protein 1-II, transcript variant 2 transcript_id : XM_001480459.1

name	Tmtc3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142348813 GeneID:237500 MGI:3036255
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : transmembrane and tetratricopeptide repeat containing 3 transcript_id : NM_001033332.2

name	4930430F08Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:28201990 GeneID:68281 MGI:1921197
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 4930430F08 gene transcript_id : NM_175128.1

name	1700017N19Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124486960 GeneID:66605 MGI:1913855
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 1700017N19 gene transcript_id : NM_001081246.1

name	LOC100042232 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149261026 GeneID:100042232
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001477820.1

name	Csl (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13386272 CCDS:CCDS24149.1 GeneID:71832 MGI:1919082
definition	GO_component : GO:0005737 - cytoplasm [Evidence IEA] GO_function : GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0006099 - tricarboxylic acid cycle [Evidence IEA] codon_start : 1 exception : mismatches in translation product : citrate synthase-like protein protein_id : NP_082221.1

name	Kitl (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:7305267 GeneID:17311 MGI:96974
definition	GO_component : GO:0005615 - extracellular space [Evidence IDA]; GO:0016021 - integral to membrane [Evidence IDA]; GO:0016020 - membrane [Evidence IEA]; GO:0005886 - plasma membrane [Evidence IDA] GO_function : GO:0008083 - growth factor activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0005173 - stem cell factor receptor binding [Evidence IDA] GO_process : GO:0007155 - cell adhesion [Evidence IEA]; GO:0007281 - germ cell development [Evidence TAS]; GO:0050731 - positive regulation of peptidyl-tyrosine phosphorylation [Evidence IDA] codon_start : 1 note : mast cell growth factor; Steel factor; stem cell factor; cloud gray; grizzle-belly product : kit ligand protein_id : NP_038626.1

name	LOC100043208 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149261131 GeneID:100043208
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001480444.1

name	LOC100043211 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149261133 GeneID:100043211
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001480447.1

name	LOC670007 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149261028 GeneID:670007
definition	codon_start : 1 product : similar to ALY protein_id : XP_001477895.1

name	LOC100043224 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149261137 GeneID:100043224
definition	codon_start : 1 product : similar to RNA and export factor binding protein 1-II isoform 1 protein_id : XP_001480455.1

name	LOC100043224 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149261139 GeneID:100043224
definition	codon_start : 1 product : similar to RNA and export factor binding protein 1-II isoform 2 protein_id : XP_001480459.1

name	LOC100043227 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149261141 GeneID:100043227
definition	codon_start : 1 product : similar to RNA and export factor binding protein 1-II isoform 1 protein_id : XP_001480461.1

name	LOC100043227 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149261143 GeneID:100043227
definition	codon_start : 1 product : similar to RNA and export factor binding protein 1-II isoform 2 protein_id : XP_001480462.1

name	LOC100043231 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149261145 GeneID:100043231
definition	codon_start : 1 product : similar to RNA and export factor binding protein 1-II isoform 1 protein_id : XP_001480464.1

name	LOC100043231 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149261147 GeneID:100043231
definition	codon_start : 1 product : similar to RNA and export factor binding protein 1-II isoform 2 protein_id : XP_001480467.1

name	LOC100043235 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149261149 GeneID:100043235
definition	codon_start : 1 product : similar to RNA and export factor binding protein 1-II isoform 1 protein_id : XP_001480472.1

name	LOC100043235 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149261151 GeneID:100043235
definition	codon_start : 1 product : similar to RNA and export factor binding protein 1-II isoform 2 protein_id : XP_001480475.1

name	LOC100043239 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149261154 GeneID:100043239
definition	codon_start : 1 product : similar to RNA and export factor binding protein 1-II isoform 1 protein_id : XP_001480483.1

name	LOC100043239 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149261156 GeneID:100043239
definition	codon_start : 1 product : similar to RNA and export factor binding protein 1-II isoform 2 protein_id : XP_001480488.1

name	LOC100043242 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149261158 GeneID:100043242
definition	codon_start : 1 product : similar to RNA and export factor binding protein 1-II isoform 1 protein_id : XP_001480492.1

name	LOC100043242 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149261160 GeneID:100043242
definition	codon_start : 1 product : similar to RNA and export factor binding protein 1-II isoform 2 protein_id : XP_001480496.1

name	LOC100043244 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149261162 GeneID:100043244
definition	codon_start : 1 product : similar to ALY protein_id : XP_001480502.1

name	LOC100043247 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149261167 GeneID:100043247
definition	codon_start : 1 product : similar to RNA and export factor binding protein 1-II isoform 2 protein_id : XP_001480509.1

name	LOC100043247 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149261165 GeneID:100043247
definition	codon_start : 1 product : similar to RNA and export factor binding protein 1-II isoform 1 protein_id : XP_001480507.1

name	Tmtc3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:75677476 CCDS:CCDS24150.1 GeneID:237500 MGI:3036255
definition	GO_function : GO:0005488 - binding [Evidence IEA] codon_start : 1 product : transmembrane and tetratricopeptide repeat containing 3 protein_id : NP_001028504.1

name	4930430F08Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:28201991 CCDS:CCDS24151.1 GeneID:68281 MGI:1921197
definition	codon_start : 1 exception : mismatches in translation product : hypothetical protein LOC68281 protein_id : NP_780337.1

name	1700017N19Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124486961 GeneID:66605 MGI:1913855
definition	codon_start : 1 product : hypothetical protein LOC66605 protein_id : NP_001074715.1

name	LOC667502 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667502
definition	number : 3 pseudo : _no_value

name	LOC667502 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667502
definition	number : 2 pseudo : _no_value

name	LOC667502 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667502
definition	number : 1 pseudo : _no_value

name	LOC100042246 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100042246
definition	number : 2 pseudo : _no_value

name	LOC100042246 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100042246
definition	number : 1 pseudo : _no_value

name	LOC235966 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:235966
definition	number : 1 pseudo : _no_value

name	LOC235966 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:235966
definition	number : 2 pseudo : _no_value

name	LOC235966 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:235966
definition	number : 3 pseudo : _no_value

name	EG667532 (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:149261134 GeneID:667532 MGI:3646823
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs, 4 Proteins product : predicted gene, EG667532 pseudo : _no_value transcript_id : XR_034683.1

name	LOC667556 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149261135 GeneID:667556
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs, 4 Proteins product : similar to THO complex 4 pseudo : _no_value transcript_id : XR_034685.1

name	LOC667580 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149261152 GeneID:667580
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs, 4 Proteins product : similar to THO complex 4 pseudo : _no_value transcript_id : XR_034691.1

name	LOC667607 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149261163 GeneID:667607
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs, 4 Proteins product : similar to THO complex 4 pseudo : _no_value transcript_id : XR_034700.1

name	EG213051 (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:149261029 GeneID:213051 MGI:3643164
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 6 Proteins product : predicted gene, EG213051 pseudo : _no_value transcript_id : XR_035690.1

clone name	MSMg01-409J03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-499P21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-162O03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-319P03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-131J06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-387E02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-088H07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-502O19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-472N20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-290M12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-063B16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-503J15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-065L18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-265O12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-451O20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-489O04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-060A02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-288A03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-141N14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-205J23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-272G05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-382C19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-363G06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-060N20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-375N06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-508E15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-465G01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-330E12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-514C19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-373F23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-346I04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-420D02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-460F15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-301G03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-474O06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-329C10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-429J01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-503D07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-201P17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-182I14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-455F21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-478I18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-458L06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-443H14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-375C06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-164B11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-528G05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-127I03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-542A11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-505A08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-325M19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-522P23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-186O11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-173H08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-497I09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-358F18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-498J21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-376G12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-426J07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-116A06
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-091J05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-050B23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-183K18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-520B07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-123J22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-126A02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-418O08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-380E18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-497K12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-483K19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-235F10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-476B24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-439P23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-533F13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-424L03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-525H23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-171G12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-518L13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-074G14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-071M04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-392L03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-465B24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-110N22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-463F14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-543L20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-409O19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-082A23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-381I05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-385O19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-349A12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-445F16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-054H24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-402M16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-401I18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-328K15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-058I10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-061F06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-137H06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-532E21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-376B07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-467L24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-460M22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-497A03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-399A20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-071I13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-074P16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-520G21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-296F12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-272F12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-124C12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-114F21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-196C15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-223B04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-187L14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-030J01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-191E07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-146I03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-290C18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-195J15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-317F16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-317I12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-113I11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-177F21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-174M08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-111J12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-307C11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-333O13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-069J24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-300P08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-162K11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-182F11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-033F16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-237P11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-219D14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-308A23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-328N09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-038H09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-241H15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-038O19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-047H14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-025C03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-046N19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-283E11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-321D10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-308I21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-320K10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-010F03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-273J04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-309N12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-072C06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-029I20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-227L20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-210N02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-238B15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-221G14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-233C24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-147N15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-201D16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-093C02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-302I21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-228E09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-161E02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-132L09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-212E05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-158M21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-288O12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-261L04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-228O08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-187P04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-184A21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-139P11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-098F14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-252I03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-272I08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-213C14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-300E11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-012H16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-198L23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-322P07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-138G22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-152D18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-269D09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-127M15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-044L22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-146H23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-048K09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-015O19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-019O12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-270E10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-283D13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-098B12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-282H03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-169C18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-347L04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-331B08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-071C10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-332E05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-338E03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-104N07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-296H12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-154I24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-127A07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-335H06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-026D03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-171H11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-289A17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-034O02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-174C11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-135P04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-161H12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-275P08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-051I11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-193C07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-009F22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-312E04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-337J05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-120F14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-019F02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-250B02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-102E18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-313B14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-067A17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-243G04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-233M09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-295H08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-005C05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-243C06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-213K08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-294N20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-315O17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-288D06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-209O19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-228K05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-002O21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-218L19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-021I13
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	MSMg01-186O11.T7 (MSMg01no186_o11.b1)	MSMg01-186O11.TJ (MSMg01no186_o11.g1)
ACC	AG378439	AG378440
length	739	757
length of high quality (start - end)	542 (45 - 586)	288 (76 - 363)
definition	CHROMAT_FILE: MSMg01no186_o11.b1 PHD_FILE: MSMg01no186_o11.b1.phd.1 CHEM: term DYE: big TIME: Tue May 17 20:02:02 2005	CHROMAT_FILE: MSMg01no186_o11.g1 PHD_FILE: MSMg01no186_o11.g1.phd.1 CHEM: term DYE: big TIME: Tue May 17 20:02:03 2005
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	CTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA ATTCACCCATGAAAGTCTTTTGACCTCTACCTGTCTGCTGTAGAACACAA TACCAAACACATCAGAAAGAACTTAAAAATAGAAAACTTAGAATAGAAAA TAAAATATAACCCGTTTGTCCAGGTCTACATAGGGGTTATGGTCACAAAC AAAATATACTAAAATAAAAACAAATGCTTTTAATCCCAGCCCTCAAGAAG CAGAGGCAGGAGGATCTTTTCAACTTCCACGATAGCTTGATACACACAGC CAGCTCTAAACTGTCCAGGGCTGCCTTGTAAGTCCTGGACTTTAGAAATA AATGACGCTATCTCTATACTTTACCAGAAGTTAAAAAATTTTAACAAACA TAATTAGAATGAAAATGACCACCCAATTTCAAAAACTGGATTATTTAAAA TTAAACGTATTTAGAGTTGAGTGTTATGATTCAGTCTGGGGAAAGAACTA TTTTATAGCTGTGAAGACCTGGAACTCTCTTAGGAGACATTGGGCTCCTT GAGACTACTTGGTGTGTTTCACTCACCTCTCTCTCAAGCCTTCTGTCTCA GGGCAGATGGATCTCTTTGGAACTTGTCTCAGCTCTTTCAGGGTGCTGTC TAGTCCTCTCCAGATTCTTTTATAATGACCCCCCCCTCTCTAGATATGCT TTTACTCTTAATATTGATTAGGATTTTCTCTACACTTAG	CGATGACXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXTAAGAAACAATCCTTTTGTGTGGCT GACTAGCACTTCTTCATGTGGATATACCACTTTGTCCAGCCATTTATCTG TTCATGGACTGTTGGGTTTTAAATTCTTTAAATAAGTTATATAAGGAAGT ATTATTTAAAAGAGAATGGCCACAGCTTTTTATGTCAGCCTGTCAACCTG TCACTCAACTCTGATCACATTCACATTTTCTCTCTCTTTTTTTAAAGATT TATTTATTTTATGTATATATGAGTACTCTGTAATTGTCTTCAGACACCAG AAAAGGGCATCGTTTGTCTTTCCACACGCCCGCGAGCCACCATGTGGTTG CTGGGAATTGAACCCCCCACCTCTGAAAAAAAAATCAGTACTCTGGGTGG CTGAGTCTTGTCTCCAATCTCCCCAATTTTTCATCAATAATCTATTGTTC TCCTTGTCTTTCCAACCCATCAAGGTTTATTTTTGTGTTTTTACCCTCTC GCCCCTTACGCTTTTCACTACCTTTCAATCCTTCCAACTTAGAAATCTGG TCTGTTTTCTTCCATGCTCCCTTTTCCGTTTGCTGTTCTCTACCACACTT CCCTTTTCGCCCCTCTAATGCTTTTTTCGCTTAAAATATATGACGGTTTA TCCACTTTTATTTCTCTTTCGTCCGCTTCTTTTTCTTTCCTCACTAACCT TTTTTAA
quality values	Open. Hide. 8 8 8 8 8 8 13 30 59 41 37 37 32 31 16 23 11 3 0 3 11 21 31 43 28 24 24 26 26 35 39 53 53 53 50 57 57 57 57 42 42 28 28 28 37 43 57 57 47 47 42 42 50 50 50 50 50 57 50 51 51 68 50 50 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 57 57 50 50 50 50 51 51 57 57 57 57 51 50 50 50 50 50 50 50 50 50 51 68 68 68 68 68 68 57 57 57 59 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 57 57 57 57 57 57 57 57 57 57 57 59 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 59 68 68 68 68 68 68 68 68 57 57 62 62 62 62 62 62 62 62 62 62 62 68 68 62 68 68 62 62 62 62 68 68 68 68 68 62 62 62 62 62 62 62 68 68 68 68 68 68 68 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 68 68 68 68 68 68 68 68 68 68 68 68 68 62 62 62 62 62 62 62 62 62 62 62 62 62 68 68 62 68 68 68 68 68 68 68 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 68 68 68 62 62 62 62 62 62 62 68 62 62 62 62 62 62 62 62 68 68 62 62 62 62 62 62 62 62 68 68 68 62 62 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 57 43 52 45 52 52 57 57 57 57 57 57 57 57 57 52 45 45 43 43 42 43 57 57 59 59 68 68 68 68 68 68 68 68 68 68 57 57 57 57 57 57 57 68 68 68 68 68 68 68 68 59 59 59 57 52 52 52 52 52 59 59 68 68 68 59 59 59 57 57 57 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 59 59 59 59 59 57 59 59 57 57 57 57 57 59 59 44 44 32 32 32 44 44 68 59 57 54 46 46 36 46 43 54 54 54 54 68 68 57 57 57 57 46 46 43 43 46 48 48 50 48 48 48 48 48 48 48 48 48 46 37 37 32 32 32 32 32 37 43 34 34 30 34 30 36 26 30 30 40 40 34 34 28 28 28 34 34 34 32 39 39 37 39 40 46 43 43 33 33 30 37 37 37 37 37 25 25 22 24 19 12 12 14 24 20 28 36 37 37 32 23 22 22 28 33 24 30 18 18 15 15 10 9 10 13 13 27 24 21 21 16 15 15 15 22 16 19 21 25 37 37 39 39 25 25 11 11 9 9 9 12 19 14 16 9 8 8 7 7 8 10 19 21 18 18 12 12 9 8 8 10 10 8 8 8 8 11 8 8 8 8 7 8 9 10 8 8 8 13 13 10 8 8 8 8 6 9 10 9 9 8 8 12 12 14 15 15 10 8 8 8 8 8 10 10 10 12 15 15 19 23 15 10 8 8 8 6 6 8 8 8 8 8 8 8 8 8 8 10 8 8 8 8 8 10 8 10 10 8 8 8 6 8 8 8 11 11 11 11 12 16 11 11 11 11 11 10 11 11 11 11 8 8 8 8	Open. Hide. 8 8 8 19 15 10 11 11 10 20 11 19 10 10 11 19 32 37 37 41 42 50 50 41 41 47 47 50 50 50 48 48 48 48 48 48 48 40 40 40 40 40 47 53 68 68 68 54 51 50 50 48 48 50 53 53 68 68 68 57 40 40 32 32 32 40 59 59 59 51 51 50 50 50 50 59 59 59 68 57 51 50 50 50 50 48 57 57 59 59 57 68 68 68 68 68 68 68 68 59 59 59 68 68 68 57 57 57 57 57 57 57 57 57 57 57 57 57 68 68 57 57 57 57 57 57 57 57 68 68 68 59 59 59 57 57 57 57 57 57 57 57 57 68 57 57 57 57 57 57 57 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 57 59 59 59 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 57 57 57 57 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 59 59 57 57 59 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 59 59 59 68 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 59 59 59 59 59 59 59 59 59 59 68 68 68 68 59 59 43 43 43 43 32 32 34 34 54 54 57 57 57 57 57 57 57 57 57 57 57 59 57 57 50 48 48 48 57 50 59 59 59 59 29 25 15 15 16 12 11 10 6 6 6 6 8 6 8 9 9 9 8 8 8 8 8 8 9 9 16 27 30 31 31 35 43 43 48 48 43 32 31 20 20 32 41 59 47 43 44 39 39 30 30 34 34 28 28 17 19 9 10 7 6 6 6 8 10 13 11 11 12 16 21 15 8 8 8 10 10 15 15 18 17 12 12 12 12 12 11 9 9 9 9 9 9 10 13 10 10 10 10 10 10 10 15 22 22 28 21 17 8 8 8 8 10 8 8 8 8 8 8 8 8 9 12 13 12 10 10 10 10 8 8 8 8 8 8 10 10 9 9 8 8 13 12 10 12 10 10 8 8 8 6 6 8 8 8 8 8 8 8 8 8 10 12 12 12 13 13 14 10 8 8 8 8 10 11 15 8 8 8 8 8 9 10 9 9 8 8 8 8 10 10 9 9 9 8 11 9 8 8 6 6 6 6 8 8 8 8 6 6 8 8 8 10 11 19 15 8 8 6 6 8 8 10 8 8 8 8 6 6 9 10 17 8 8 6 6 8 8 8 10 8 8 8 8 8 10 13 10 11 11 10 9 9 10 10 9 10 11 8 10 8 8 8 10 8 8 8 8 8 9 12 9 8 8 8 8 8 6 6 6 8 10 8 8 12 10 8 8 8 8 8 8 8 8 8 8 11 9 9 10 9 9 9 13 10 10 8 8 8 8 10 10 10 10 10 14 9 9 8 8 8 8 8 10 8 8 8 12 12 10 6 8 6 6 8 8 6 6 8 8 10 8 8 6 8 8 10 10 10 13 15 13 13 12 15 8 8 8 8 8 8 8 7 7 8 8 9 9 8 8 8 10 8 8 10 8 8 8 8 8 8 8 8 8 9 10 10 10 10 10 10 10 10 15 15 10 10 8 7 7

Alignment Information

BAC End 1

BAC End 2

Query= MSMg01no186_o11.g1 MSMg01no186_o11.g1 CHROMAT_FILE:
MSMg01no186_o11.g1 PHD_FILE: MSMg01no186_o11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:02:03 2005
         (288 letters)



>mm_chr10_99914499_99915186
          Length = 688

 Score =  555 bits (287), Expect = e-162
 Identities = 287/287 (100%)
 Strand = Plus / Minus

                                                                       
Query: 1   taagaaacaatccttttgtgtggctgactagcacttcttcatgtggatataccactttgt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 498 taagaaacaatccttttgtgtggctgactagcacttcttcatgtggatataccactttgt 439

                                                                       
Query: 61  ccagccatttatctgttcatggactgttgggttttaaattctttaaataagttatataag 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 ccagccatttatctgttcatggactgttgggttttaaattctttaaataagttatataag 379

                                                                       
Query: 121 gaagtattatttaaaagagaatggccacagctttttatgtcagcctgtcaacctgtcact 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 gaagtattatttaaaagagaatggccacagctttttatgtcagcctgtcaacctgtcact 319

                                                                       
Query: 181 caactctgatcacattcacattttctctctctttttttaaagatttatttattttatgta 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 caactctgatcacattcacattttctctctctttttttaaagatttatttattttatgta 259

                                                          
Query: 241 tatatgagtactctgtaattgtcttcagacaccagaaaagggcatcg 287
           |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 tatatgagtactctgtaattgtcttcagacaccagaaaagggcatcg 212


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 288
Length of database: 688
Length adjustment: 9
Effective length of query: 279
Effective length of database: 679
Effective search space:   189441
Effective search space used:   189441
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information