Query= MSMg01no188_d18.b1 MSMg01no188_d18.b1 CHROMAT_FILE:
MSMg01no188_d18.b1 PHD_FILE: MSMg01no188_d18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:03:49 2005
(195 letters)
>mm_chr10_43418669_43419263
Length = 595
Score = 344 bits (178), Expect = 2e-99
Identities = 187/190 (98%)
Strand = Plus / Plus
Query: 5 gaattcaagcccttaggactatgccaaagccaggcaaggtagaggaggactgaggctcgt 64
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcaagcccgaaggactatgccaaagccaggcaaggtagaggaggactgaggctcgt 264
Query: 65 gtacaactgtgtgtggacagccatggaatgcaggggggatttgaaggcagggatctgagt 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 265 gtacaactgtgtgtggacagccatggaatgcaggggggatttgaaggcagggatccgagt 324
Query: 125 caaggcctccaaatcaagaatttggagtttgggagataggagtggaaaaagattggaggt 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 caaggcctccaaatcaagaatttggagtttgggagataggagtggaaaaagattggaggt 384
Query: 185 tgtgtgaagg 194
||||||||||
Sbjct: 385 tgtgtgaagg 394
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 195
Length of database: 595
Length adjustment: 8
Effective length of query: 187
Effective length of database: 587
Effective search space: 109769
Effective search space used: 109769
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no188_d18.g1 MSMg01no188_d18.g1 CHROMAT_FILE:
MSMg01no188_d18.g1 PHD_FILE: MSMg01no188_d18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:03:49 2005
(239 letters)
>mm_chr10_43534302_43534937
Length = 636
Score = 418 bits (216), Expect = e-121
Identities = 230/238 (96%), Gaps = 7/238 (2%)
Strand = Plus / Minus
Query: 1 caaggagactcgccatctttcagagttaccctcgtcagtggactgtctccatggctgaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 caaggagactcgccatctttcagagttaccctcgtcagtggactgtctccatggctgaag 374
Query: 61 gaagtgttgccatgacccaggtacttccggttccggtcccctccatctccttcctgcagt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 gaagtgttgccatgacccaggtacttccggttccggtcccctccatctccttcctgcagt 314
Query: 121 tcccaacttctgcctctttgcatttctgcctcttttctcctgcattttat--ggatactg 178
||||||||||||||||||||||||||||||||||||||| |||| | ||||||||
Sbjct: 313 tcccaacttctgcctctttgcatttctgcctcttttctc-----ttttctcaggatactg 259
Query: 179 cctggcacattgaagaatcaaatagctctaactgccagctgaccaaattttgcaattc 236
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 cctggcacattgaagaatcaaatagctctaactgccagctgaccaaattttgcaattc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 239
Length of database: 636
Length adjustment: 9
Effective length of query: 230
Effective length of database: 627
Effective search space: 144210
Effective search space used: 144210
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
