Query= MSMg01no189_n15.b1 MSMg01no189_n15.b1 CHROMAT_FILE:
MSMg01no189_n15.b1 PHD_FILE: MSMg01no189_n15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:05:56 2005
(312 letters)
>mm_chr10_4348200_4348911
Length = 712
Score = 596 bits (308), Expect = e-175
Identities = 308/308 (100%)
Strand = Plus / Plus
Query: 5 gaattctctaaaatactggattataagtacagtgctttaaaaattagaaaactggctgtt 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctctaaaatactggattataagtacagtgctttaaaaattagaaaactggctgtt 264
Query: 65 atacaaatgtatcacttattaaagtagctttgtcaaaaggaaaagaaaagaagagaaaag 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 atacaaatgtatcacttattaaagtagctttgtcaaaaggaaaagaaaagaagagaaaag 324
Query: 125 aaaagaaagtagctttgttattttaattcaaaagcactttgtcacaaaatcaactcagag 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 aaaagaaagtagctttgttattttaattcaaaagcactttgtcacaaaatcaactcagag 384
Query: 185 ccattgtaaaacaatttaaattatagtcctctcttttgcctagggaaaacaactgctatc 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ccattgtaaaacaatttaaattatagtcctctcttttgcctagggaaaacaactgctatc 444
Query: 245 agaatttaagttatatatttatatttattttttattctttaatcttttttatagtcctgt 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 agaatttaagttatatatttatatttattttttattctttaatcttttttatagtcctgt 504
Query: 305 ctttatac 312
||||||||
Sbjct: 505 ctttatac 512
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 312
Length of database: 712
Length adjustment: 9
Effective length of query: 303
Effective length of database: 703
Effective search space: 213009
Effective search space used: 213009
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no189_n15.g1 MSMg01no189_n15.g1 CHROMAT_FILE:
MSMg01no189_n15.g1 PHD_FILE: MSMg01no189_n15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:05:56 2005
(296 letters)
>mm_chr10_4449532_4450227
Length = 696
Score = 485 bits (251), Expect = e-141
Identities = 285/297 (95%), Gaps = 5/297 (1%)
Strand = Plus / Minus
Query: 1 cagatgctcctgtctctacctcccaagt-gtaggttacccctattatcaccgatattcct 59
|||||||||||||||||||||||||||| | |||||| ||||| ||||| |||||| ||
Sbjct: 659 cagatgctcctgtctctacctcccaagtag-aggttatccctaccatcactgatatttct 601
Query: 60 ttatttcaatatctactttttaatttacaaccacacatgccttggatatctttaattctt 119
||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 600 ttatttcaatatctactttttaatttacaac--cacatgccttggatatctttaattctt 543
Query: 120 tttttaattagatattttctttatttacatttcaataaaatccccttgatatctttaatt 179
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 ttttt-attagatattttctttatttacatttcaataaaatccccttgatatctttaatt 484
Query: 180 cttgttcaaaggtttaacaggagagatttagactcagtttcaaatacgcctgggtcaaga 239
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 483 cttgttcaaaggtttaacaggagagatttagactcagtttcaaatacgccagggtcaaga 424
Query: 240 tgaagttcaagtaagtataactttagtttaatttgaattagttttctactttatcac 296
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 423 tgaagttcaagtaagtataactgtagtttaatttgaattagttttctactttatcac 367
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 4
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 296
Length of database: 696
Length adjustment: 9
Effective length of query: 287
Effective length of database: 687
Effective search space: 197169
Effective search space used: 197169
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
