Query= MSMg01no191_c11.b1 MSMg01no191_c11.b1 CHROMAT_FILE:
MSMg01no191_c11.b1 PHD_FILE: MSMg01no191_c11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:07:39 2005
(320 letters)
>mm_chr10_52937599_52938316
Length = 718
Score = 520 bits (269), Expect = e-152
Identities = 305/317 (96%), Gaps = 3/317 (0%)
Strand = Plus / Minus
Query: 4 ggaattcttgttctaaagcaagcaagcaaacaaacaaacaaaaaaatcaagaaagtggta 63
||||||||||||||||||||||||| ||||||||||||| ||| || | |||||||||||
Sbjct: 566 ggaattcttgttctaaagcaagcaaacaaacaaacaaac-aaacaacccagaaagtggta 508
Query: 64 atatgactttctatctttgttcttctaaagccatattttattcatttaatagaatacagt 123
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 507 atatgactttctatttttgttcttctaaagccatattttattcatttaatagaatacagt 448
Query: 124 tattgtttggtttacgttctctgaaactatattttattgattttttcacaaagcttatcc 183
||||| |||||||| ||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 447 tattgcttggtttatgttctctgaaactatattttattga-tttttcacaaagcttatcc 389
Query: 184 aaaagaaactgtcagaaataaaagcctctcatctttcagtgaggctaatcctactggtac 243
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 388 aaaagaaactgtcagaaataaaagcctctcatctttcagtgaggctaaccctactggtac 329
Query: 244 tgtgcctaccccaaaaagttctgagttaagaaaatgactcttggctttgcatttaaaaat 303
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 328 tgtgcctacccccaaaagttctgagttaagaaaatgactcttggctttgcatttaaaaat 269
Query: 304 aaaaaagggaaataatt 320
||||| |||||||||||
Sbjct: 268 aaaaa-gggaaataatt 253
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 320
Length of database: 718
Length adjustment: 9
Effective length of query: 311
Effective length of database: 709
Effective search space: 220499
Effective search space used: 220499
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no191_c11.g1 MSMg01no191_c11.g1 CHROMAT_FILE:
MSMg01no191_c11.g1 PHD_FILE: MSMg01no191_c11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:07:39 2005
(238 letters)
>mm_chr10_52824225_52824862
Length = 638
Score = 416 bits (215), Expect = e-121
Identities = 233/239 (97%), Gaps = 2/239 (0%)
Strand = Plus / Plus
Query: 1 tcattgctttttttttttta-aataaagctaaaaaaaaaaaaaaacaagagaaaatgcaa 59
||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||
Sbjct: 201 tcattgcttttttttttttttaataaagctaaaaaaaaaaaaaa-caagagaaaatgcaa 259
Query: 60 catcttgtcttttgaaaaataagttaaatgtttctgtcaccatttatgatatccggtatt 119
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 catcttgtcttttggaaaataagttaaatgtttctgtcaccatttatgatatccggtatt 319
Query: 120 tattctgattaataccgatgtttgccaggctattcctttctggggaaaatgaaaactctc 179
||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 320 tattctgattaatactgatgtttgccaggctattcctttctgggggaaatgaaaactctc 379
Query: 180 tctactatgtattaataaaacctcttgggtgacttccaagatgatcctgttacctggag 238
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 tctactatgtattaataaaacctcttgggtgacttccaagatgatcctgttacctggag 438
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 238
Length of database: 638
Length adjustment: 9
Effective length of query: 229
Effective length of database: 629
Effective search space: 144041
Effective search space used: 144041
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
