Query= MSMg01no192_e06.b1 MSMg01no192_e06.b1 CHROMAT_FILE:
MSMg01no192_e06.b1 PHD_FILE: MSMg01no192_e06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:09:23 2005
(424 letters)
>mm_chr10_27151831_27152655
Length = 825
Score = 737 bits (381), Expect = 0.0
Identities = 399/405 (98%), Gaps = 1/405 (0%)
Strand = Plus / Minus
Query: 17 gaattctggagaattttgatagtagtgtggctttccttctctccgtgtgatactggcaat 76
|||||||||||||||||| ||||||||||||||||||||| || ||||||||||||||||
Sbjct: 621 gaattctggagaattttggtagtagtgtggctttccttctttcagtgtgatactggcaat 562
Query: 77 gccagatgcttaatggggaaggttagagacatctactccctataacatgcatgtaaaatg 136
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gccagatgcttaatggggaaggttagagacatctactccctataacatgcatgtaaaatg 502
Query: 137 agttccagcaactatccttgtttgtagcataaactcaatacccatcctacagttactgtt 196
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 agttccagcaactatccttgtttgtagcataaactcaatacccatcctacagttactgtt 442
Query: 197 ggcatagaggcaggtcttctggatgctaattctccaccattcttccttcttacagatctt 256
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ggcatagaggcaggtcttctggatgctaattctccaccattcttccttcttacagatctt 382
Query: 257 cactgataattgtggtcacttcttagctgtctgctatgtggtctctttttcaaatctcgt 316
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 381 cactgataattgtggtcacttcttagctgtctgctatgtggtctctttttcgaatctcgt 322
Query: 317 ttcttgtcatgagacacacaggaagacttgctgtgttgtatttccactagtggttttctc 376
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttcttgtcatgagacacacaggaagacttgctgtgttgtatttccactagtggttttctc 262
Query: 377 tgcatatgtatttgttt-gctctactgtttgttggtcagacagtg 420
||||||||||||| ||| |||||||||||||||||||||||||||
Sbjct: 261 tgcatatgtattttttttgctctactgtttgttggtcagacagtg 217
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 424
Length of database: 825
Length adjustment: 9
Effective length of query: 415
Effective length of database: 816
Effective search space: 338640
Effective search space used: 338640
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no192_e06.g1 MSMg01no192_e06.g1 CHROMAT_FILE:
MSMg01no192_e06.g1 PHD_FILE: MSMg01no192_e06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:09:24 2005
(381 letters)
>mm_chr10_27113515_27114293
Length = 779
Score = 659 bits (341), Expect = 0.0
Identities = 366/375 (97%), Gaps = 2/375 (0%)
Strand = Plus / Plus
Query: 5 aagaatgctagggtctagctgtcacattgaaatgctaatttcaatgcctcaaaaggagac 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 aagaatgctagggtctagctgtcacattgaaatgctaatttcaatgcctcaaaaggagac 264
Query: 65 tagatagtgcttttattattaaatgttctaccctgtgtgctgcctataacttcaatcctc 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tagatagtgcttttattattaaatgttctaccctgtgtgctgcctataacttcaatcctc 324
Query: 125 attagttaattcttgtggttataatggtattacttatggtttctatttttgcaggtcaga 184
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 325 attagttaattcttgtggttataatggtattatttatggtttctatttttgcaggtcaga 384
Query: 185 aaaggttacaagatattaaagaatttagccaagaacacaaagttgaaaaaattggtagat 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 aaaggttacaagatattaaagaatttagccaagaacacaaagttgaaaaaattggtagat 444
Query: 245 gagactcaattctaagagctggtgagctattataggccatgatgaacaagggcaacatgg 304
|||||||||||||||||||||||||||| |||||||||| ||||||||||| |||||||
Sbjct: 445 gagactcaattctaagagctggtgagctggtataggccataatgaacaagggaaacatgg 504
Query: 305 tgaatgcagtgggcgcgggccaactcctccacagtccctgtccagcaacctgagaatggc 364
||||||||||||| | | |||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 tgaatgcagtgggtg--gaccaactcctccacagtccctgtccagcaacctgagaatggc 562
Query: 365 ttggtttcactaatg 379
|||||||||||||||
Sbjct: 563 ttggtttcactaatg 577
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 381
Length of database: 779
Length adjustment: 9
Effective length of query: 372
Effective length of database: 770
Effective search space: 286440
Effective search space used: 286440
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
