CTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCAGACTTTTGCCTTTCTATCAGCTGAAAATGGTAAGGACAATTCTC
CACAGCCATTACTGTACTCAAGTGTGGCACAGAGTAGAAATCGTTAGTGA
GGGTATTTTTCTTAAGAGTAATCTGTTTGGTGGCTGATAATAATTCATGT
ACCACCTTTTCTCCCATGACTGAAGGATGCATGTTGATTGTTGTAAATAA
CTGGCTAAATGCCAAAGAGGAAAAAAAGAGGAACACAGACAAAAGAGGTG
CTCCGCTCATTGTGAAAGACAAAATTGTTGAGGTCTGCTAATTATATTAA
TTAACTGAAATGAATAATGTATCAGGAAAGGAGGCTGATTGATATCAGCA
GTAATGAATTTAAATCACATAACAAGCTTTTCAAGACGCGTGTCAGATTT
CACAGGCACCCCTTCAGCCACAGACTTCTCTGGAGCTAACAATTTCCAGT
CCATAATGGGAAAGCAAGTGTGGGCGGACAGGTAACTTGGGACAGGTTGG
TCCCAAATGGCTGGTGGGATCTGACCTCAACGAAAAAGTTCAACGACTGT
CCTGTATAACCCTTCAAGGGTCAATTTGTATCTCAAGCTATTTTCACAGA
GGATTGTATCATGCCGTTGGAAAAATGGCAAGCAATAGCTAAAACAGGAG
TGATGCAAATACAGAAAT

CGAATGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXATTCCCCAGTCCCATAAAAAACAA
CACGGAAACCGCATTTCTATCTGCAGTCTATGCTGTTGGCGGTGGCAAAG
GCTGGCAAGATGGCTCAGTGGGTAAAGGAGTTGGGCGGTGAGTTCCCTCC
AGATGACACACATAGTGGAAGGTGGAAGCACACTTACAAGTTGTCCTCTG
ACTTTCATGTGCATGTGACTCTCACAAGTGCCTCTCCCCCACATTATTAT
TTTTTACTAAAAAACTTAGAAAACTTTTATTTATGGGATGTTTCACAACA
TTTAATATATTTTTTTGTCTCCCCCCCCCCAGAGAGAAACAAGGAATACC
CAGTGCCAGATGCTGGACATATTTGAGCACAGTTTAAAGCTGTAGCTATT
TATCATCTCAAGGAATAAGAACACACCATGTCACTCAGTTTTGAAACCAT
TGTTCTCTTGATATTTTTCTCTAAATTGAATGCTGAATTCTGATGGGTAG
GAGATCCTTGGAAGAAAATTAATCCAAAATATATTTTTAAACATAATCTT
CTACCAAGTAAATTTGGTTGTCATGATTTCCTACATTTGTTGTGAATTGA
GTTAAAGAAAAGAGAGCTCTATTTATTAAAGTAGTTATTAATTTCCTAGA
TAAGAGGATGTCTCTCTGATTG

Query= MSMg01no194_f09.b1 MSMg01no194_f09.b1 CHROMAT_FILE:
MSMg01no194_f09.b1 PHD_FILE: MSMg01no194_f09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:13:10 2005
         (659 letters)



>mm_chr10_118831781_118832844
          Length = 1064

 Score = 1160 bits (600), Expect = 0.0
 Identities = 643/664 (96%), Gaps = 13/664 (1%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattcagacttttgcctttctatcagctgaaaatggtaaggacaattctccacagccat 64
           ||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 864 gaattcagacttttggctttctatcagctgaaactggtaaggacaattctccacagccat 805

                                                                       
Query: 65  tactgtactcaagtgtggcacagagtagaaatcgttagtgagggtatttttcttaagagt 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 804 tactgtactcaagtgtggcacagagtagaaatcgttagtgagggtatttttcttaagagt 745

                                                                       
Query: 125 aatctgtttggtggctgataataattcatgtaccaccttttctcccatgactgaaggatg 184
           ||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||
Sbjct: 744 aatctgtttggtggctgataataattcatgtaccaccttttctcccacgagtgaaggatg 685

                                                                       
Query: 185 catgttgattgttgtaaataactggctaaatgccaaagagg----aaaaaaagaggaaca 240
           |||||||||||||||||||||||||||||||||||||||||    |||||||||||||||
Sbjct: 684 catgttgattgttgtaaataactggctaaatgccaaagaggaaaaaaaaaaagaggaaca 625

                                                                       
Query: 241 cagacaaaagaggtgctccgctcattgtgaaagacaaaattgttgaggtctgctaattat 300
           |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 cagacaaaagaggtgctctgctcattgtgaaagacaaaattgttgaggtctgctaattat 565

                                                                       
Query: 301 attaattaactgaaatgaataatgtatcaggaaaggaggctgattgatatcagcagtaat 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 attaattaactgaaatgaataatgtatcaggaaaggaggctgattgatatcagcagtaat 505

                                                                       
Query: 361 gaatttaaatcacataacaagcttttcaagacgcgtgtcagatttcacaggcaccccttc 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 gaatttaaatcacataacaagcttttcaagacgcgtgtcagatttcacaggcaccccttc 445

                                                                       
Query: 421 agccacagacttctctggagctaacaatttccagtccataatgggaaagcaagtgtgggc 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 agccacagacttctctggagctaacaatttccagtccataatgggaaagcaagtgtgggc 385

                                                                       
Query: 481 ggacaggtaacttgggacaggttggtc-----ccaaatggctggtgggatctgacctcaa 535
           |||||||||||||||||||    ||||     ||||||||||||||||||||||||||||
Sbjct: 384 ggacaggtaacttgggaca----ggtcacgcaccaaatggctggtgggatctgacctcaa 329

                                                                       
Query: 536 cgaaaaagttcaacgactgtcctgtataacccttcaagggtcaatttgtatctcaagcta 595
           | |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 328 caaaaaagttcaacgactgtcctgtataacccttcaagtgtcaatttgtatctcaagcta 269

                                                                       
Query: 596 ttttcacagaggattgtatcatgccgttggaaaaatggcaagcaatagctaaaacaggag 655
           ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 268 ttttcacagaggattgtatcatgccgttggaaaaatgtcaagcaatagctaaaacaggag 209

               
Query: 656 tgat 659
           ||||
Sbjct: 208 tgat 205


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 659
Length of database: 1064
Length adjustment: 10
Effective length of query: 649
Effective length of database: 1054
Effective search space:   684046
Effective search space used:   684046
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)