Query= MSMg01no196_m15.b1 MSMg01no196_m15.b1 CHROMAT_FILE:
MSMg01no196_m15.b1 PHD_FILE: MSMg01no196_m15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:16:27 2005
(281 letters)
>mm_chr10_101449794_101450474
Length = 681
Score = 474 bits (245), Expect = e-138
Identities = 266/273 (97%), Gaps = 2/273 (0%)
Strand = Plus / Minus
Query: 5 gaattccccgagtcatcttgctacccatgagaaaaatgtcattccagaatgcttaaaatg 64
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 390 gaattccctgagtcatcttgctacccatgagaaaaatgtcattccagaatgcttaaaatg 331
Query: 65 ttattcatgataactatctaaattggactataggaatccaacatcttatgaccactctct 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 330 ttattcatgataactatctaaattggactataggaatccaacatcttatgaccactctct 271
Query: 125 ggtgtgtgtgtgtgtgttgctctgactaaacaatcagataaaaaagcagcttaggaaaga 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 270 ggtgtgtgtgtgtgtgttgctctgactaaacaatcagataaaaaagcagcttaggaaaga 211
Query: 185 aagggttctctctctctctctctctctctctctctctctctctctctctcacacacacac 244
|||||||||||||||||||||||||||||||||||||||||| | | | |||||||||||
Sbjct: 210 aagggttctctctctctctctctctctctctctctctctctcacacacacacacacacac 151
Query: 245 acacacacacacacacaca-tacacacacacac 276
||||||||||||||||||| | |||||||||||
Sbjct: 150 acacacacacacacacacact-cacacacacac 119
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 84
Number of extensions: 15
Number of successful extensions: 15
Number of sequences better than 10.0: 1
Number of HSP's gapped: 11
Number of HSP's successfully gapped: 1
Length of query: 281
Length of database: 681
Length adjustment: 9
Effective length of query: 272
Effective length of database: 672
Effective search space: 182784
Effective search space used: 182784
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no196_m15.g1 MSMg01no196_m15.g1 CHROMAT_FILE:
MSMg01no196_m15.g1 PHD_FILE: MSMg01no196_m15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:16:27 2005
(289 letters)
>mm_chr10_101296809_101297497
Length = 689
Score = 460 bits (238), Expect = e-134
Identities = 274/286 (95%)
Strand = Plus / Plus
Query: 1 atataattgaggtagaagaatacaccacagtccaattggcacagatgaccctaacatagt 60
||||| ||||||||||||||||||||| |||||||||||||||||||| ||||||||||
Sbjct: 201 atatatttgaggtagaagaatacaccatagtccaattggcacagatgaaactaacatagt 260
Query: 61 aatgttcagtgtatattataaccatgttcaaatataagtgactggggggtagagagatat 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 261 aatgttcagtgtatattataaccatgttcaaatataagtgactggggggtagagagatgt 320
Query: 121 ctcagacattaagaaatctgagaatttcccaaaagtggctcagaattccaagagacctaa 180
|||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 321 ctcagacattaagagatctgagaatttcccacaagtggctcagaattccaagagacctaa 380
Query: 181 tatcctctttgggtcttcatgtgtaatttattaagtattatatacactagcacagatata 240
||||||||||| ||||||||||||||||| ||||||||||||||||||| ||||||||||
Sbjct: 381 tatcctctttgtgtcttcatgtgtaatttcttaagtattatatacactaacacagatata 440
Query: 241 attgcacacacatacatacatgaaaataaatatatataatttttaa 286
|||||||||||||||| | |||||||||||||||||||||||||||
Sbjct: 441 attgcacacacatacacaaatgaaaataaatatatataatttttaa 486
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 289
Length of database: 689
Length adjustment: 9
Effective length of query: 280
Effective length of database: 680
Effective search space: 190400
Effective search space used: 190400
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
