Query= MSMg01no196_p16.b1 MSMg01no196_p16.b1 CHROMAT_FILE:
MSMg01no196_p16.b1 PHD_FILE: MSMg01no196_p16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:16:42 2005
(206 letters)
>mm_chr10_68626337_68626943
Length = 607
Score = 369 bits (191), Expect = e-107
Identities = 203/207 (98%), Gaps = 3/207 (1%)
Strand = Plus / Minus
Query: 1 aggaaaaaaagcagggggtggcgggt-tgtgt-acaacgtttgaacagagactagaagct 58
|||||||||||||||||||||| ||| ||||| |||||||||||||||||||||||||||
Sbjct: 406 aggaaaaaaagcagggggtggc-ggtatgtgtaacaacgtttgaacagagactagaagct 348
Query: 59 gaggacagctatatgcgatcaagtcatactggagaacagtaagtgaacgtgcaaaggccc 118
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 347 gaggacagctatatgcgatcaagtcatactggagaacagtaagtgaacgtgcaaaggccc 288
Query: 119 tgaggcaggctgaacttaaaagacgcagagggtctgggacagactaaaattggggaggag 178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 287 tgaggcaggctgaacttaaaagacgcagagggtctgggacagactaaaattggggaggag 228
Query: 179 ggagagagagggaaatgtggtctagga 205
||||||||||||||||||||||||||
Sbjct: 227 agagagagagggaaatgtggtctagga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 206
Length of database: 607
Length adjustment: 8
Effective length of query: 198
Effective length of database: 599
Effective search space: 118602
Effective search space used: 118602
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no196_p16.g1 MSMg01no196_p16.g1 CHROMAT_FILE:
MSMg01no196_p16.g1 PHD_FILE: MSMg01no196_p16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:16:42 2005
(276 letters)
>mm_chr10_68591279_68591959
Length = 681
Score = 482 bits (249), Expect = e-140
Identities = 268/277 (96%), Gaps = 5/277 (1%)
Strand = Plus / Plus
Query: 5 gatgatgtcagtgtccctgggaaagaattagagtctggactacccttgtgcttctggcac 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gatgatgtcagtgtccctgggaaagaattagagtctggactacccttgtgcttctggcac 264
Query: 65 aggtcctgaaagtctgtggctctatgtgataggtgttcagatgaccatgaatggatttct 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 aggtcctgaaagtctgtggctctatgtgataggtgttcagatgaccatgaatggatttct 324
Query: 125 cttggtggttttccgttttgctatttgttgttattagttttgtttgttatctagcaat-- 182
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 cctggtggttttccgttttgctatttgttgttattagttttgtttgttatctagcaatgg 384
Query: 183 ---ctataaagggttgggtcaagaacttgactttggttcatgggaatgtgtgccctgcta 239
|||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||
Sbjct: 385 actctataaagggttgggtaaagaacttgactttggttcatggaaatgtgtgccctgcta 444
Query: 240 tgcatttctttctggtgtcaggagaaggggttggtgc 276
||||||||||||| |||||||||||||||||||||||
Sbjct: 445 tgcatttctttctagtgtcaggagaaggggttggtgc 481
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 276
Length of database: 681
Length adjustment: 9
Effective length of query: 267
Effective length of database: 672
Effective search space: 179424
Effective search space used: 179424
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
