Query= MSMg01no197_f24.b1 MSMg01no197_f24.b1 CHROMAT_FILE:
MSMg01no197_f24.b1 PHD_FILE: MSMg01no197_f24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:17:14 2005
(202 letters)
>mm_chr10_123684101_123684700
Length = 600
Score = 356 bits (184), Expect = e-103
Identities = 193/196 (98%), Gaps = 2/196 (1%)
Strand = Plus / Minus
Query: 4 ggaattcacacatcccactgccaattctgccaggctgtcatcatgccctaacctttcaca 63
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 332 ggaattcacaca-cccactgccaattctgccaggctgtcatcatgccctaacctttcaca 274
Query: 64 cttttctgttccacggtctctgatgcaaatgagcccatatggacagaaaatggatgtaaa 123
||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 273 cttttctgttcta-ggtctctgatgcaaatgagcccatatggacagaaaatggatgtaaa 215
Query: 124 gaaaacgaaagtatatgcctcaggataggggaacaccagggccaagaagtgggagtgggt 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 214 gaaaacgaaagtatatgcctcaggataggggaacaccagggccaagaagtgggagtgggt 155
Query: 184 gggtaggggagtgggt 199
||||||||||||||||
Sbjct: 154 gggtaggggagtgggt 139
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 202
Length of database: 600
Length adjustment: 8
Effective length of query: 194
Effective length of database: 592
Effective search space: 114848
Effective search space used: 114848
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no197_f24.g1 MSMg01no197_f24.g1 CHROMAT_FILE:
MSMg01no197_f24.g1 PHD_FILE: MSMg01no197_f24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:17:14 2005
(189 letters)
>mm_chr10_123526577_123527165
Length = 589
Score = 311 bits (161), Expect = 1e-89
Identities = 182/189 (96%)
Strand = Plus / Plus
Query: 1 ttgatgcccaattgggaagtaaaaggtagaaacctctaagccaatgtagaaatcccgtga 60
|||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 201 ttgatgcccatttgggaagtaaaaggtagaaacctctaagccaatgtagaaatcccttga 260
Query: 61 ggttgggtgctgtgtggaaatcactgcgggcggagaaggtgaatgtgtttggactggtta 120
| |||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 261 gcttggatgctgtgtggaaatcactgcgggcggagaaggtgaatgggtttggactggtta 320
Query: 121 tagtttacaatgcagaacttaatgaacaaaacttatgattttccttgtagtcattctcac 180
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tagtttacaatacagaacttaatgaacaaaacttatgattttccttgtagtcattctcac 380
Query: 181 tccaatcct 189
|||| ||||
Sbjct: 381 tccagtcct 389
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 6
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 189
Length of database: 589
Length adjustment: 8
Effective length of query: 181
Effective length of database: 581
Effective search space: 105161
Effective search space used: 105161
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
