Query= MSMg01no203_i07.b1 MSMg01no203_i07.b1 CHROMAT_FILE:
MSMg01no203_i07.b1 PHD_FILE: MSMg01no203_i07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:24:42 2005
(379 letters)
>mm_chr10_105399055_105399833
Length = 779
Score = 692 bits (358), Expect = 0.0
Identities = 367/370 (99%)
Strand = Plus / Plus
Query: 8 gaattcatagttctaatgcatattttcattttaactgactttatagcaggttttgcccag 67
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 208 gaattcatagttctaatggatattttcattttaactgactttatagcaggttttgcccag 267
Query: 68 gacaatctagaacgatcacaaatcatctgttttcttgagacaaatacttaattgaagaga 127
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 268 gacaatctagaacgataacaaatcatctgttttcttgagacaaatacttaattgaagaga 327
Query: 128 tgagctattagatcatttaggttactttgttgtcatggaaacaagtctttaaaagtaaaa 187
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 328 tgagctattagatcattcaggttactttgttgtcatggaaacaagtctttaaaagtaaaa 387
Query: 188 aaaaagatgtagtttttgagttttttcaatatagaaatttatcttcaataacagtttggc 247
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 388 aaaaagatgtagtttttgagttttttcaatatagaaatttatcttcaataacagtttggc 447
Query: 248 atacaatgcacttgtcttaatgtagcactatattccataatttttcttgtaaatacatct 307
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 448 atacaatgcacttgtcttaatgtagcactatattccataatttttcttgtaaatacatct 507
Query: 308 gtacatgaaagatattgctagttgcagggaaacagaaaaggagaaagaaagaaagaaaga 367
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 508 gtacatgaaagatattgctagttgcagggaaacagaaaaggagaaagaaagaaagaaaga 567
Query: 368 aagaaagaaa 377
||||||||||
Sbjct: 568 aagaaagaaa 577
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 10
Number of successful extensions: 10
Number of sequences better than 10.0: 1
Number of HSP's gapped: 10
Number of HSP's successfully gapped: 1
Length of query: 379
Length of database: 779
Length adjustment: 9
Effective length of query: 370
Effective length of database: 770
Effective search space: 284900
Effective search space used: 284900
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no203_i07.g1 MSMg01no203_i07.g1 CHROMAT_FILE:
MSMg01no203_i07.g1 PHD_FILE: MSMg01no203_i07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:24:42 2005
(288 letters)
>mm_chr10_105501060_105501748
Length = 689
Score = 528 bits (273), Expect = e-154
Identities = 285/289 (98%), Gaps = 1/289 (0%)
Strand = Plus / Minus
Query: 1 cctgttctttctcctcaactttccggcaaaacccaaaagtactcttt-aacaaaaattca 59
||||||||||||||||||||||||||||||||||||||||||| ||| || |||||||||
Sbjct: 489 cctgttctttctcctcaactttccggcaaaacccaaaagtactatttaaaaaaaaattca 430
Query: 60 atttaaatcattcaaattcataaagcagtagtctttggaatagctatataaaaggtagta 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 429 atttaaatcattcaaattcataaagcagtagtctttggaatagctatataaaaggtagta 370
Query: 120 tttgatcatccccatctccaattcaaaacaattaattctactagagtgttctttaaggag 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 tttgatcatccccatctccaattcaaaacaattaattctactagagtgttctttaaggag 310
Query: 180 acagaaacccatgaaaatggcttttaaacaagaatatgaaaaagtgttttaaaggaggga 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 acagaaacccatgaaaatggcttttaaacaagaatatgaaaaagtgttttaaaggaggga 250
Query: 240 aaccattacaaaggaaagacatgagttacaataatcacaaatggtttca 288
|||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 aaccattataaaggaaagacatgagttacaataatcacaaatggtttca 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 288
Length of database: 689
Length adjustment: 9
Effective length of query: 279
Effective length of database: 680
Effective search space: 189720
Effective search space used: 189720
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
