TCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCCTCTTTCTCCACATTAAGGAAAAGCTTTTTAAAAAGGTATTTACC
CAAATAGTAAGATGCAGGAGTTTGCGGCATCACTTAGAGTAGAGGAACAC
TCTTATTCTCTCACTGCTGCAGGTTGGTGTCACTCAAGTTAACCTTTAAA
ATGGTCAGCACTGGTCAGTAATGCTGAAGAGCTCAGCAGGTAAAGGTCTT
TGTCGTCAAGTCTGGTGGTCCAAGTTGAGTCACCAGAATCCATAGTGGAA
GGAGAGAAGCAACTCCAACAAGTTGTCCTCTGACTTCCATATCTGTTTCA
TGACACATAGTCCCAATAATAAATAAAATTTTAGTTTACAAATTAAAGCA
CACTAGTCATAAAAAATTACACCTAATAAACTATCTTTAAGTTTAGAATG
TATATGCCAAGATATGCTCTTGACAGAAAAGACAGCGAACACTCTAGGGA
TTCAAAGTACAAAAGTATAAACATATTTTAGCGAACAATTATCCAAAAGA
AGAGAGATTATTTTCCTGCATCTCCATCAAGTCATGTTCTCATCTTACTT
AGGTTTGATAAGTGTGTGTGTGTGTGTGTGTNNNTTTNNTTTTTTTTTNT
TTTTTTTTTNTTTCCCTNTTCTTTTTTTTTTNTNTTTCTTTNTTTTTTTT
TTTTTTCTTTTCCTTTTTTTTTCTCCTT

CGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXTCACCTGAGGAATACCGAATGGCT
GAGAAGCACTTGAAAAAATGTTCAGCACTTCTTAATCTTCAGGGAAATAC
AAATCAAAACAACCCTGAGATTCCTTCTCACACCAGTCAGAATGGCTAAG
ATCCAAACTTCCGGTGACAGCAGATGCTGGGGAGGATGTGGAGAAAGAGG
AACACTCTTACATTGTTGGTGGATTGCAAGCTTGTACAACCACTCTGGAA
ATCAGTCTGGCGGTTCCTCAGAAAATTGGACATATTAATACCGGAGGGTC
CTGCTATATCTCTCCTGGATATATATCCAGAAGATGTTCCAACTGGTAGG
AAGGACACATGTTTCACTACCCCCCTCCCANCCTTACTTATAGTAGCCAG
AAGCTGGAAAGAACCCAGATTTCCCTCAACAGAGGAATGGATACAGAAAA
TGTGATACATTTACACAATGGAGTTCTAACCAGCTATTAAAAACAATGAA
TTTATGAAATTCCTAGGCAAATGGATGGACCTGGAGGTGATCATCCTGAG
TGAGGTAACCTAATTACAAAAGGACTCATATGATATGTACTCACTGATAA
GCGGTTATTTACCCCTTTACTTTACTATTCTTATTATCCAGTTTTTATTT
TGCCAATCCCTTTTACCTGTAGATTTATCTCTTCCCTTT

Query= MSMg01no204_l18.b1 MSMg01no204_l18.b1 CHROMAT_FILE:
MSMg01no204_l18.b1 PHD_FILE: MSMg01no204_l18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:26:23 2005
         (589 letters)



>mm_chr10_14690325_14691312
          Length = 988

 Score =  841 bits (435), Expect = 0.0
 Identities = 483/499 (96%), Gaps = 4/499 (0%)
 Strand = Plus / Minus

                                                                       
Query: 89  ttagagtagaggaacactcttattctctcactgctgcaggttggtgtcactcaagttaac 148
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 988 ttagagtagaggaacactcttattctctcactgctgcaggttggtgtcactcaagttaac 929

                                                                       
Query: 149 ctttaaaatggtcagcactggtcagtaatgctgaagagctcagcaggtaaaggtctttg- 207
           ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| 
Sbjct: 928 ctttaaaatggtcagcactggtcagtaatgctgaaaagctcagcaggtaaaggtctttgc 869

                                                                       
Query: 208 tcgtcaagtctggtggtccaagttgagtcaccagaatccatagtggaaggagagaagcaa 267
           |  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 868 t-atcaagtctggtggtccaagttgagtcaccagaatccatagtggaaggagagaagcaa 810

                                                                       
Query: 268 ctccaacaagttgtcctctgacttccatatctgtttcatgacacatagtcccaataataa 327
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 809 ctccaacaagttgtcctctgacttccatatctgtttcatgacacatagtcccaataataa 750

                                                                       
Query: 328 ataaaattttagtttacaaattaaagcacactagtcataaaaaattacacctaataaact 387
           |||||||||||| |||||||||||||||||||||||||||||||||| |  |||||||||
Sbjct: 749 ataaaattttaggttacaaattaaagcacactagtcataaaaaattatagttaataaact 690

                                                                       
Query: 388 atctttaagtttagaatgtatatgccaagatatgctcttgacagaaaagacagcgaacac 447
           ||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||
Sbjct: 689 atctttaagtttagaatgtatatgccaagatatgctcttgacagaaaaggcagcaaacac 630

                                                                       
Query: 448 tctagggattcaaagtacaaaagtataaacatattttagcgaacaattatccaaaagaag 507
           ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 629 tctagggattcaaagtacaaaagcataaacatattttagcgaacaattatccaaaagaag 570

                                                                       
Query: 508 agagattattttcctgcatctccatcaagtcatgttctcatcttacttaggtttgataag 567
           |||||||||||||||||||||||| ||||| |||||||||| ||| ||||||||||||| 
Sbjct: 569 agagattattttcctgcatctccaccaagtaatgttctcat-ttagttaggtttgataa- 512

                              
Query: 568 tgtgtgtgtgtgtgtgtgt 586
           |||||||||||||||||||
Sbjct: 511 tgtgtgtgtgtgtgtgtgt 493


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 589
Length of database: 988
Length adjustment: 10
Effective length of query: 579
Effective length of database: 978
Effective search space:   566262
Effective search space used:   566262
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)