Query= MSMg01no204_o17.b1 MSMg01no204_o17.b1 CHROMAT_FILE:
MSMg01no204_o17.b1 PHD_FILE: MSMg01no204_o17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:26:38 2005
(229 letters)
>mm_chr10_80661265_80661891
Length = 627
Score = 310 bits (160), Expect = 6e-89
Identities = 178/186 (95%), Gaps = 7/186 (3%)
Strand = Plus / Minus
Query: 1 accaaagccaagtctcactctatagggttatttggaatctcctaaatacacacacacaca 60
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 348 accaaagccaagtctcactctatagggttatttggaatctcctaaat--acacacacaca 291
Query: 61 acacatgctgcctgtcctgcaaccagcatacctgtctcctctcacacacaaccatacacc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 290 acacatgctgcctgtcctgcaaccagcatacctgtctcctctcacacacaaccatacacc 231
Query: 121 ccctgaaccatggtgacagtctcagtgtgattttttgttttgtttggttttttttttt-t 179
|||||||||||||||||||||||||||||||||||| ||||||| |||| |||||| |
Sbjct: 230 ccctgaaccatggtgacagtctcagtgtgatttttt--tttgttt--ttttgttttttgt 175
Query: 180 tttttg 185
||||||
Sbjct: 174 tttttg 169
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 229
Length of database: 627
Length adjustment: 9
Effective length of query: 220
Effective length of database: 618
Effective search space: 135960
Effective search space used: 135960
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no204_o17.g1 MSMg01no204_o17.g1 CHROMAT_FILE:
MSMg01no204_o17.g1 PHD_FILE: MSMg01no204_o17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:26:38 2005
(296 letters)
>mm_chr10_80507281_80507976
Length = 696
Score = 543 bits (281), Expect = e-159
Identities = 292/296 (98%)
Strand = Plus / Plus
Query: 1 ctgtcactcagtgactcacactcaccccacccctccctgcagctcctaggtggctggagg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctgtcactcagtgactcacactcaccccacccctccctgcagctcctaggtggctggagg 260
Query: 61 aactgatgctggtgtgtcgtcttctgtagactcctccagggaggtgtggggccagtaaga 120
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aactggtgctggtgtgtcgtcttctgtagactcctccagggaggtgtggggccagtaaga 320
Query: 121 gtacaaaaccgaaggggagggatgaaggaaaacacaaggtggggacgagtccgtcttaac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gtacaaaaccgaaggggagggatgaaggaaaacacaaggtggggacgagtccgtcttaac 380
Query: 181 atgcaggtccagtttctctcttgagctgcccgacggagaanatgctaaaacaccaggagg 240
||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||
Sbjct: 381 atgcaggtccagtttctctctcgagctgcccgacggagaaaatgctaaaacaccaggagg 440
Query: 241 ccgcggagcgaagggacactcgggtcacctgcagacagaagacaggcagtgagagc 296
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 441 ccgcggagcgaagggacactcgggtcacctgcagacagaagacgggcagtgagagc 496
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 296
Length of database: 696
Length adjustment: 9
Effective length of query: 287
Effective length of database: 687
Effective search space: 197169
Effective search space used: 197169
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
